Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0676
(576 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 37 5e-04
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript... 35 0.002
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 34 0.003
AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcript... 33 0.009
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 32 0.012
AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript... 32 0.012
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein. 31 0.020
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript... 31 0.020
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 31 0.027
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 31 0.035
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 29 0.082
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 1.3
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 1.8
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 5.4
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 5.4
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 36.7 bits (81), Expect = 5e-04
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +1
Query: 100 F*CNVAALRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXG 279
F C LRR R + R I +R+ S AAC++AG P + + DYR + S+
Sbjct: 784 FECRKQWLRRCHRPLVNRVISAFRSTSHDAACVIAGMMPLHILID---EDYRVRQRSITT 840
Query: 280 GRAPRRRCSSXAEAPHS 330
G + + + AE P+S
Sbjct: 841 GVS--SKLARIAERPYS 855
>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
protein.
Length = 1099
Score = 34.7 bits (76), Expect = 0.002
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYR 255
L R QR +A+R R +RTV + A LLAG P L + A Y+
Sbjct: 807 LERVQRKMALRVARAFRTVRYETATLLAGLTPICLLLDEDARVYQ 851
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 34.3 bits (75), Expect = 0.003
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPP 216
L+R QR A+R R +RTV + A LLAG P
Sbjct: 867 LQRVQRKAAIRVARAFRTVRYETATLLAGLVP 898
>AB090815-2|BAC57906.1| 973|Anopheles gambiae reverse transcriptase
protein.
Length = 973
Score = 32.7 bits (71), Expect = 0.009
Identities = 32/109 (29%), Positives = 45/109 (41%)
Frame = +1
Query: 127 RPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPRRRCS 306
R R +A+R +R Y+T+S A C++A P L LA D S R S
Sbjct: 784 RVHRLLAMRVVRAYKTISHVAVCVIASMVPICL---ILAEDSECCSFSGVSNAGLSR--S 838
Query: 307 SXAEAPHSAVRAGGVVSPLGGPVDGLRTVXAVRPVLADWVXRDRGFLNF 453
S + ++ S G RT A+ P +A W R G +NF
Sbjct: 839 SAKQLSMRKWQSEWDCSTKG------RTTHALIPNIAAWTSRKHGEVNF 881
Score = 25.4 bits (53), Expect = 1.3
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2
Query: 452 FRATQMLTGHGCFRPVL 502
F TQ L+ HGCFR L
Sbjct: 881 FYMTQFLSDHGCFRSYL 897
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 32.3 bits (70), Expect = 0.012
Identities = 19/58 (32%), Positives = 25/58 (43%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPR 294
LRR R + R I +RT S A C+LAG P L + + + R G R
Sbjct: 786 LRRFYRPVVQRVISSFRTTSHDAVCVLAGMIPLHLLLDEDSRTFHRRRAENIAGSVAR 843
>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
protein.
Length = 1049
Score = 32.3 bits (70), Expect = 0.012
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVR 264
+ + R +A+R YRT+S+ A C++A P + E + ++R R
Sbjct: 843 VNKVHRKLAMRVTSAYRTISYEAVCVIASMMPLCITLEEDSKNFRKSR 890
Score = 27.5 bits (58), Expect = 0.33
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2
Query: 461 TQMLTGHGCFRPVL 502
TQ+L+GHGCFR L
Sbjct: 947 TQVLSGHGCFRSYL 960
>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
Length = 1212
Score = 31.5 bits (68), Expect = 0.020
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAE 234
L R QR A R R +RTV + A LLAG P L E
Sbjct: 874 LERVQRVSARRVARTFRTVRYETATLLAGLTPICLLIE 911
>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
protein.
Length = 1154
Score = 31.5 bits (68), Expect = 0.020
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYR 255
L+R QR A+R R +RTV + A L AG P A+A D R
Sbjct: 822 LKRVQRKAAIRVARTFRTVRYETAVLPAGLVP---ICRAVAEDTR 863
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 31.1 bits (67), Expect = 0.027
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPP 216
LRR QR A+ R +RTV + A LLAG P
Sbjct: 883 LRRVQRKSAIGLARTFRTVRYETAVLLAGLLP 914
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 30.7 bits (66), Expect = 0.035
Identities = 32/112 (28%), Positives = 43/112 (38%), Gaps = 1/112 (0%)
Frame = +1
Query: 121 LRRPQRAIAVRAIRGYRTVSFXAACLLAGAPPWDLXAEALAADYRGVRXSLXGGRAPRRR 300
L R QR A+ R +RTV + A LLAG P A+ D R S G A +
Sbjct: 827 LERVQRKSAIAVARTFRTVRYETAVLLAGLLP---ICRAICEDTR--VHSRRGTAAGAQL 881
Query: 301 CSSXAEAPHSAVRAGGVVSPLGGPVDG-LRTVXAVRPVLADWVXRDRGFLNF 453
E + +A G G +R + P + W R G +NF
Sbjct: 882 RKEERETTIAEWQATWDSDAAGHQASGYVRWAHRLIPDIGAWQSRKHGEVNF 933
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 29.5 bits (63), Expect = 0.082
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +1
Query: 118 ALRRPQRAIAVRAIRGYRTVSFXAACLLAGAPP 216
+++R R A+R ++TVS+ AAC++A P
Sbjct: 803 SVQRAHRPGALRVASAFQTVSYDAACVVANTTP 835
Score = 22.6 bits (46), Expect = 9.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 452 FRATQMLTGHGCFR 493
F TQ+LTGHG R
Sbjct: 910 FFLTQLLTGHGFLR 923
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 25.4 bits (53), Expect = 1.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 292 RRRCSSXAEAPHSAVRAGGVVSPLGG 369
RR +AP A +GGV SP+GG
Sbjct: 247 RRVKRKKGDAPFGAELSGGVSSPVGG 272
>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
protein.
Length = 1222
Score = 25.0 bits (52), Expect = 1.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 452 FRATQMLTGHGCFRPVL 502
F +Q+LTGHG FR L
Sbjct: 923 FHLSQVLTGHGYFREYL 939
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.4 bits (48), Expect = 5.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 353 SRRLXDPSMASEPSXRSARFSRTGWXATADSS 448
+RR DPSM +PS +RTG AT + S
Sbjct: 684 ARRSSDPSMTLDPSI----INRTGGPATLNLS 711
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.4 bits (48), Expect = 5.4
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 353 SRRLXDPSMASEPSXRSARFSRTGWXATADSS 448
+RR DPSM +PS +RTG AT + S
Sbjct: 684 ARRSSDPSMTLDPSI----INRTGGPATLNLS 711
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 455,806
Number of Sequences: 2352
Number of extensions: 7204
Number of successful extensions: 33
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -