Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0674
         (480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   5.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   7.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    22   9.5  

>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 5.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 31  LKMQFYFTKMTSSLGTLPQPH 93
           LKM  Y  +M++S+G  P  H
Sbjct: 390 LKMPLYADEMSASIGLEPHAH 410


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 48   FYKDDVESWNAPTTASMQLFEYSKAPDLPRARQS 149
            FY   V S +A     + +F ++ +PD PR   S
Sbjct: 925  FYLSQVLSGHAFVHEFLHVFGFAPSPDCPRCAGS 958


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 22.2 bits (45), Expect = 9.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 342 RIRGRTNRXIMQLKKKXQLIDKWSS 268
           RI    NR +  L++  + +DKW +
Sbjct: 229 RIVNEANRLVRGLERLNEPVDKWDT 253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,290
Number of Sequences: 2352
Number of extensions: 6734
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 41863041
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)