Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0673
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    27   0.18 
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    27   0.18 
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    27   0.18 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.8  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   8.8  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 162 HSFLVQFYTTVFN-FNNNLMSFHYCLYYNCL*TRNHVLTQ 46
           +S  + F T +   F N LM   YC Y N L  R  +L +
Sbjct: 175 YSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLNE 214


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 11/35 (31%), Positives = 15/35 (42%)
 Frame = -3

Query: 186 ISFRNLFWHSFLVQFYTTVFNFNNNLMSFHYCLYY 82
           I+F    W  F +   T  +NFN N +    C  Y
Sbjct: 405 ITFMRTVWKFFNIFLITPFYNFNENTIHSKLCKLY 439


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -3

Query: 162 HSFLVQFYTTVFN-FNNNLMSFHYCLYYNCL*TRNHVLTQ 46
           +S  + F T +   F N LM   YC Y N L  R  +L +
Sbjct: 175 YSLFIVFMTVILPYFINLLMELQYCHYLNILRVRYQLLNE 214


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 238 PDISPVTKPESAYSSSRNFVSESFL 164
           P  SPV+KP S  S     + E FL
Sbjct: 42  PIYSPVSKPVSFESLPNRRLHEEFL 66


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -2

Query: 70  NTEPCFDTKMSRNKQPHY 17
           N+E CF  K+   K P +
Sbjct: 521 NSEMCFSLKLKNKKLPPF 538


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 485 RVCPEKSWLDVPNDY 529
           +V  EKSW+ + +DY
Sbjct: 257 KVTSEKSWIALNDDY 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,852
Number of Sequences: 336
Number of extensions: 3160
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)