Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0672
(786 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 4e-11
SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.028
SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.049
SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2) 29 3.2
SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_31204| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_595| Best HMM Match : CH (HMM E-Value=0) 28 9.9
>SB_17617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 65.7 bits (153), Expect = 4e-11
Identities = 31/39 (79%), Positives = 33/39 (84%)
Frame = -3
Query: 118 WIVARRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
WI RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 5 WIYERRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_57691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 106 RRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6465| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 106 RRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_2383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 106 RRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 9 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_27342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 60.5 bits (140), Expect = 2e-09
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = -3
Query: 106 RRTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
RRT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 11 RRTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 45
>SB_58054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 65
Score = 58.4 bits (135), Expect = 6e-09
Identities = 28/34 (82%), Positives = 30/34 (88%)
Frame = -3
Query: 103 RTSAKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
RT+AKAFAK VFINQERKLE RRR DT LVLT+N
Sbjct: 29 RTTAKAFAKNVFINQERKLEDRRRSDTVLVLTIN 62
>SB_1204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 48.0 bits (109), Expect = 9e-06
Identities = 23/27 (85%), Positives = 24/27 (88%)
Frame = -3
Query: 103 RTSAKAFAKGVFINQERKLEVRRRLDT 23
RT+AKAFAK VFINQERKLE RRR DT
Sbjct: 2 RTTAKAFAKNVFINQERKLEDRRRSDT 28
>SB_33624| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 48.0 bits (109), Expect = 9e-06
Identities = 24/36 (66%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
R+T+ ++ AK VFINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESIAKNVFINQERKLEDRRRSDTVLVLTIN 43
>SB_6881| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
R+T+ ++ + VFINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESICQDVFINQERKLEDRRRSDTVLVLTIN 43
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = -2
Query: 128 VKXLDRRKTNISESICQRCFHQSRTKV 48
VK LD RKTN ESICQ F K+
Sbjct: 2 VKFLDLRKTNYCESICQDVFINQERKL 28
>SB_26327| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
R+T+ ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2
Query: 110 RKTNISESICQRCFHQSRTKV 48
RKTN ESICQ CF K+
Sbjct: 8 RKTNYCESICQECFINQERKL 28
>SB_1546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
R+T+ ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 128 VKXLDRRKTNISESICQRCFHQSRTKV 48
VK LD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
>SB_13730| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/36 (58%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Frame = -3
Query: 106 RRTS-AKAFAKGVFINQERKLEVRRRLDTALVLTVN 2
R+T+ ++ + FINQERKLE RRR DT LVLT+N
Sbjct: 8 RKTNYCESICQECFINQERKLEDRRRSDTVLVLTIN 43
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = -2
Query: 128 VKXLDRRKTNISESICQRCFHQSRTKV 48
VK LD RKTN ESICQ CF K+
Sbjct: 2 VKFLDLRKTNYCESICQECFINQERKL 28
>SB_492| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 36.3 bits (80), Expect = 0.028
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -1
Query: 513 SSAVIPAPIAYTKIVAVKKL 454
++AVIPAPIAY K+VAVKKL
Sbjct: 34 AAAVIPAPIAYIKVVAVKKL 53
>SB_51316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 36.3 bits (80), Expect = 0.028
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -1
Query: 513 SSAVIPAPIAYTKIVAVKKL 454
++AVIPAPIAY K+VAVKKL
Sbjct: 79 AAAVIPAPIAYIKVVAVKKL 98
>SB_18209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 180
Score = 36.3 bits (80), Expect = 0.028
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -1
Query: 513 SSAVIPAPIAYTKIVAVKKL 454
++AVIPAPIAY K+VAVKKL
Sbjct: 71 AAAVIPAPIAYIKVVAVKKL 90
>SB_18079| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 36.3 bits (80), Expect = 0.028
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -1
Query: 513 SSAVIPAPIAYTKIVAVKKL 454
++AVIPAPIAY K+VAVKKL
Sbjct: 24 AAAVIPAPIAYIKVVAVKKL 43
>SB_15948| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 36.3 bits (80), Expect = 0.028
Identities = 16/20 (80%), Positives = 19/20 (95%)
Frame = -1
Query: 513 SSAVIPAPIAYTKIVAVKKL 454
++AVIPAPIAY K+VAVKKL
Sbjct: 11 AAAVIPAPIAYIKVVAVKKL 30
>SB_50608| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 40
Score = 35.5 bits (78), Expect = 0.049
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1
Query: 507 AVIPAPIAYTKIVAVKKL 454
AVIPAPIAY K+VAVKKL
Sbjct: 9 AVIPAPIAYIKVVAVKKL 26
>SB_44560| Best HMM Match : DUF1086 (HMM E-Value=1.2)
Length = 918
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 397 RVSITAXACTDSAAHKCNYELFNRNNFSIRYWS-WNYRAAGTRLALQLFLVKXFKVYSFR 573
R I A D+ Y L F+I W + G+R L+ F++ +KVY R
Sbjct: 696 RFGIHAWKVHDTRLEGSRYTL---GRFTIHDWKVHDTHLEGSRYTLERFMIHPWKVYDTR 752
Query: 574 LRGL 585
L GL
Sbjct: 753 LEGL 756
>SB_21059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1024
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/40 (25%), Positives = 22/40 (55%)
Frame = +1
Query: 190 KTNKIEPRSYSIIPCTKYSSSILARFEHSNXFKVKLSAHL 309
K + ++ Y+ + +S RFEH+N ++KL+ ++
Sbjct: 725 KNHSVDKHDYNNVTPLLFSQERFERFEHNNSLEIKLTVNI 764
>SB_31204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 975
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/60 (31%), Positives = 27/60 (45%)
Frame = -2
Query: 725 LTGKSGFDSGEGX*ETATTSKEGSRRANYPLPARGGSDEK*RYGTLTRPRNRNEYTLNXL 546
LT GF+S G + T+KEG++ YP E+ L R + E +LN L
Sbjct: 231 LTQNLGFESSYG--NSTDTTKEGAQLQGYPEEINRRKKERRMKKRLGRKPGKEESSLNEL 288
>SB_595| Best HMM Match : CH (HMM E-Value=0)
Length = 905
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = -1
Query: 720 GEIRXRFXRGXXRNGYHIQGRQQA--RKLPTPGT 625
G R RG ++GY+ +QQA RK+P PG+
Sbjct: 325 GSNEVRSNRGTIQSGYYFCKQQQAARRKIPKPGS 358
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,790,084
Number of Sequences: 59808
Number of extensions: 380747
Number of successful extensions: 767
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2155861620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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