Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0671
         (707 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A6C91 Cluster: Microtubule-associated protein 9...    35   2.3  
UniRef50_Q4YVS4 Cluster: Putative uncharacterized protein; n=2; ...    34   3.0  
UniRef50_Q8T145 Cluster: Similar to ATP-dependent RNA helicase, ...    33   6.9  

>UniRef50_UPI00015A6C91 Cluster: Microtubule-associated protein 9
           (Aster-associated protein).; n=2; Danio rerio|Rep:
           Microtubule-associated protein 9 (Aster-associated
           protein). - Danio rerio
          Length = 643

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 21/57 (36%), Positives = 26/57 (45%)
 Frame = +2

Query: 5   GGVLSRPAPRPAHKHYSWERIEYDAT*XPAPHPRLRAVRHSISGGTRT*TLFXARDT 175
           G     P P P+ KH   ++IE D    P P PR R V+   S G+     F  RDT
Sbjct: 119 GSQWDSPVPLPSEKHEDNQKIEKDDE-VPVPQPRERTVKSKSSAGSNN---FFDRDT 171


>UniRef50_Q4YVS4 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 940

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
 Frame = -2

Query: 562 HNTKLNMRNL-ISSAQVNSDTTGRNVSVPIKISYDDFPLSFIVIGRNADFHNYV 404
           +N   N+ N+       + +T  +N+ VPIK  Y+  PL+F +IG+   F NYV
Sbjct: 47  YNDYKNLENMKYKKNNKHENTFQKNMFVPIKDEYNK-PLTFFIIGKFTFFSNYV 99


>UniRef50_Q8T145 Cluster: Similar to ATP-dependent RNA helicase,
           putative; protein id: At1g35530.1; n=2; Dictyostelium
           discoideum|Rep: Similar to ATP-dependent RNA helicase,
           putative; protein id: At1g35530.1 - Dictyostelium
           discoideum (Slime mold)
          Length = 1789

 Score = 33.1 bits (72), Expect = 6.9
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = -2

Query: 568 NRHNTKLNMRNLISSAQVNSDTTGRNVSVPIKISYDDFPLSF 443
           N +N   N  N  ++   N++    N++ PI+I  DDF LSF
Sbjct: 174 NNNNNNNNNNNNNNNNNNNNNNNNNNINNPIEIELDDFELSF 215


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,067,825
Number of Sequences: 1657284
Number of extensions: 9916558
Number of successful extensions: 21269
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20781
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21268
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56611575523
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)