Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0669
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U23519-9|ABS19470.1|  203|Caenorhabditis elegans Hypothetical pr...    29   2.8  
U39999-6|AAA81107.2|  198|Caenorhabditis elegans Hypothetical pr...    29   3.6  

>U23519-9|ABS19470.1|  203|Caenorhabditis elegans Hypothetical
           protein F26G1.11 protein.
          Length = 203

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = -3

Query: 271 IEPAFLERRLTDDMSANVSVSPRMRCTDSAAHKCNYELFNRNNFSIRY 128
           IE    + R  +++ +N++V      + SA HK NYEL    +F +RY
Sbjct: 85  IEHGCTKGRSEEEIQSNINVYSEFPISLSALHKHNYEL--NQDFELRY 130


>U39999-6|AAA81107.2|  198|Caenorhabditis elegans Hypothetical
           protein F41G3.10 protein.
          Length = 198

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 231 CPQTCQYHRGCGAPTARRTNATTSFL 154
           CP+TC Y  G G  T  RT+ T + L
Sbjct: 133 CPRTCGYCSGSGVVTTTRTSTTCADL 158


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,620,605
Number of Sequences: 27780
Number of extensions: 327332
Number of successful extensions: 652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 624
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)