Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0666
         (915 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    42   9e-06
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    42   9e-06
AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical pro...    28   0.12 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    27   0.27 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.5  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   3.3  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    23   4.4  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   5.8  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.8  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      22   7.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.7  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.7  

>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 41.5 bits (93), Expect = 9e-06
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 513 VPKDPRQWSEXPVTAWLRWAAREFSLEGVAFNSSREL-RGKDICAMGREEFVARAP 677
           +PKDPRQW+   V  W+    ++  L  V   SSR L  GK +C M    F++R P
Sbjct: 32  LPKDPRQWTREHVAQWINLVTQQHGLPEVP--SSRFLMNGKALCLMSLGMFLSRVP 85


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 41.5 bits (93), Expect = 9e-06
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
 Frame = +3

Query: 513 VPKDPRQWSEXPVTAWLRWAAREFSLEGVAFNSSREL-RGKDICAMGREEFVARAP 677
           +PKDPRQW+   V  W+    ++  L  V   SSR L  GK +C M    F++R P
Sbjct: 32  LPKDPRQWTREHVAQWINLVTQQHGLPEVP--SSRFLMNGKALCLMSLGMFLSRVP 85


>AM712904-1|CAN84643.1|   86|Tribolium castaneum hypothetical
           protein protein.
          Length = 86

 Score = 27.9 bits (59), Expect = 0.12
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
 Frame = -3

Query: 232 GRSLVKGCLLESIVGLA--LRPLQLHSAGTLDFNYFIQISDMYGALGETII 86
           G  ++ GC+   ++G      PL L +   +DFNY+   +  Y   G  +I
Sbjct: 30  GFLIIAGCVSPFVIGYVKHFHPLALSNKNAIDFNYYYYAA-TYARFGPYVI 79


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 26.6 bits (56), Expect = 0.27
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 328 PQEA-EEPRAMQKVPSLSDLSDPEASLDIPSQVPPLTPGTNKKMAEA 465
           P+ A E P++ +  P  ++LSD +  LD+    PPL    N    E+
Sbjct: 30  PETALEAPKSPENHPE-TELSDSDCDLDVTGTPPPLDCSKNSPEKES 75


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 12/56 (21%), Positives = 27/56 (48%)
 Frame = +1

Query: 331 QEAEEPRAMQKVPSLSDLSDPEASLDIPSQVPPLTPGTNKKMAEALKATFASWEKE 498
           Q  + P   Q+ PS++DLS  + +  +P      +P     + + ++ +F S  ++
Sbjct: 692 QNEKSPSPQQRSPSVTDLSTKDGT-TVPESNNGSSPSVLNAIEKLIEKSFDSRSRQ 746


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 15/52 (28%), Positives = 19/52 (36%)
 Frame = +2

Query: 194 YGLEEAAFYEAPTAVAPPPRSMSRSVLD*TCVTRVVATPMA*SVSPRKLRSP 349
           YGL        P+   PPP S+    +   C T          V+ RK R P
Sbjct: 198 YGLRNYGPEPVPSTPYPPPGSLGSMGVSVPCGTSGNPLEWTGQVTVRKKRKP 249


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 730 VEKEXSLLANVRPTCNESNVCFPELPEYIHR 822
           ++ E  L  + +  CN S    PE  E IHR
Sbjct: 291 IKVEPELSDSEKTLCNGSKGISPEQEELIHR 321


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 370 SLSDLSDPEASLDIPSQVPPLTP 438
           SL  +  P    D+PS +PP  P
Sbjct: 196 SLRCVVPPTEDCDVPSTIPPPPP 218


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -2

Query: 722 CKISRCSQKYVSHECRRSGDE 660
           C +  C  KY+  +C+R  +E
Sbjct: 774 CTVCTCDAKYLEIKCKRIYNE 794


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -2

Query: 551 YWLFAPLSWI 522
           +W FAP+ W+
Sbjct: 259 HWAFAPIRWV 268


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 699 KVCLP*MPALWRRTLRGPSHR 637
           K C P     WRR   GP HR
Sbjct: 588 KPCRPREQLTWRRNFHGP-HR 607


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 699 KVCLP*MPALWRRTLRGPSHR 637
           K C P     WRR   GP HR
Sbjct: 480 KPCRPREQLTWRRNFHGP-HR 499


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,844
Number of Sequences: 336
Number of extensions: 4292
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25547951
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)