Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0666
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z82071-1|CAB04917.1| 209|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical ... 29 3.5
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 29 6.1
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 29 6.1
Z77136-9|CAI91180.1| 474|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z77136-7|CAD54177.1| 472|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z77136-6|CAB00883.1| 488|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z79599-1|CAB01871.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 519 KDPRQWSEXPVTAWLRWAAREFSL--EGVAFNSSRELRGKDICAMGREEFVARAPAFMGD 692
KDP +W V AW+ A+ ++ E + + L G+++ M F+ R P F G+
Sbjct: 134 KDPNEWLVDDVVAWMLDVAKRHNIPFEEMNMHKFAMLSGQEMLTMSERCFIERDPVF-GN 192
Query: 693 ILLGTSR 713
++ R
Sbjct: 193 LIFNEFR 199
>Z79597-3|CAB01862.4| 493|Caenorhabditis elegans Hypothetical
protein C33A11.4 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.28
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 519 KDPRQWSEXPVTAWLRWAAREFSL--EGVAFNSSRELRGKDICAMGREEFVARAPAFMGD 692
KDP +W V AW+ A+ ++ E + + L G+++ M F+ R P F G+
Sbjct: 134 KDPNEWLVDDVVAWMLDVAKRHNIPFEEMNMHKFAMLSGQEMLTMSERCFIERDPVF-GN 192
Query: 693 ILLGTSR 713
++ R
Sbjct: 193 LIFNEFR 199
>Z82071-1|CAB04917.1| 209|Caenorhabditis elegans Hypothetical
protein W05B5.1 protein.
Length = 209
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -2
Query: 323 HFMPSALPPPSSHKSSLRLNETCSLEE 243
HF +A PPP++H+S L L S E+
Sbjct: 131 HFTQAATPPPTNHESPLYLQNGLSKEQ 157
>AF043700-6|AAB97569.2| 443|Caenorhabditis elegans Hypothetical
protein K09H9.2 protein.
Length = 443
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 301 GNADGIKC-EPQEA-EEPRAMQKVPSLSDLSDPEASLDIPSQVPPLTPGTNKKMAE 462
GN + I EPQ+ EEP M+K+ D + + DI S+ P NK M +
Sbjct: 24 GNEENIVAPEPQKTLEEPSVMEKLQHAIREKDAQFTFDILSKNRPFDQAMNKTMTK 79
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 314 PSALPPPSSHKSSLRLNETCSLEEAPRRSEPRKR 213
PS+ PP SS SS+ L+E S S P KR
Sbjct: 357 PSSPPPSSSVSSSISLSEVNSSTSIASESSPAKR 390
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 314 PSALPPPSSHKSSLRLNETCSLEEAPRRSEPRKR 213
PS+ PP SS SS+ L+E S S P KR
Sbjct: 371 PSSPPPSSSVSSSISLSEVNSSTSIASESSPAKR 404
>Z77136-9|CAI91180.1| 474|Caenorhabditis elegans Hypothetical
protein ZC376.7c protein.
Length = 474
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Frame = -2
Query: 344 SSASWGSHFMPSALPPPSSHKSSLRLNETCSLEEAPRRSEP------RKRLPPRVH 195
SS G +PPPSSH S L+ + S R S P R P R+H
Sbjct: 257 SSPDSGISLYDPMIPPPSSHFPSFNLSSSSSASNLLRLSTPSAPMQQEHRAPVRMH 312
>Z77136-7|CAD54177.1| 472|Caenorhabditis elegans Hypothetical
protein ZC376.7b protein.
Length = 472
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Frame = -2
Query: 344 SSASWGSHFMPSALPPPSSHKSSLRLNETCSLEEAPRRSEP------RKRLPPRVH 195
SS G +PPPSSH S L+ + S R S P R P R+H
Sbjct: 255 SSPDSGISLYDPMIPPPSSHFPSFNLSSSSSASNLLRLSTPSAPMQQEHRAPVRMH 310
>Z77136-6|CAB00883.1| 488|Caenorhabditis elegans Hypothetical
protein ZC376.7a protein.
Length = 488
Score = 28.3 bits (60), Expect = 8.1
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 6/56 (10%)
Frame = -2
Query: 344 SSASWGSHFMPSALPPPSSHKSSLRLNETCSLEEAPRRSEP------RKRLPPRVH 195
SS G +PPPSSH S L+ + S R S P R P R+H
Sbjct: 271 SSPDSGISLYDPMIPPPSSHFPSFNLSSSSSASNLLRLSTPSAPMQQEHRAPVRMH 326
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,289,032
Number of Sequences: 27780
Number of extensions: 423363
Number of successful extensions: 1414
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1414
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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