Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0665
         (848 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcript...    27   0.54 
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.7  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   6.7  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   6.7  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.7  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.9  

>AB090815-2|BAC57906.1|  973|Anopheles gambiae reverse transcriptase
           protein.
          Length = 973

 Score = 27.5 bits (58), Expect = 0.54
 Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 67  TVRQRRFPHH-PKWPHSAGNQPTQHPPSVICSRLGGSSTNLRWSGLPSP 210
           T+ ++ FP+H P+ P      P   P S+    +  ++ +L+    P P
Sbjct: 365 TIIEQLFPNHEPQTPRDISRNPDVEPVSISADEIQKAADHLKLGKAPGP 413


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +1

Query: 64  LTVRQRRFPHHPKWPHSAGNQPTQHPPSVICSRLGGSSTNLRWSGLP 204
           ++ R  RFP  P+       +  QH PS +    G SS  L  +G+P
Sbjct: 702 MSPRPNRFPSRPR-------RQQQHQPSALAGCSGSSSGGLARNGVP 741


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 112 SAGNQPTQHPPSVICSRLGGSSTN 183
           S  + PT  PPSV    L GS T+
Sbjct: 52  SCSSAPTMTPPSVQAEGLRGSETD 75


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = +1

Query: 415 LAVPDSTIASLQSGNETNSRRRLNPLRHISNSTRHDLDQ 531
           L++ +S +   Q  +E   RR+L  LR+    T  DL++
Sbjct: 487 LSIAESELKICQH-DEVTERRKLESLRYSYEETEKDLEE 524


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling
            promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 9/23 (39%), Positives = 10/23 (43%)
 Frame = +1

Query: 79   RRFPHHPKWPHSAGNQPTQHPPS 147
            RR  H   WP    N+    PPS
Sbjct: 1035 RRLSHSKSWPKGTENENYMVPPS 1057


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 12/50 (24%), Positives = 23/50 (46%)
 Frame = -1

Query: 314 TKPTTPRTCRGSVRGNDNGXYIEWRIWMSGSVSSDGDGRPDQRKFVEDPP 165
           ++PT P        GN+N       + ++G+V+  G   P Q++ +   P
Sbjct: 190 SRPTEPAGPPVRQSGNNNAANSSTPLTVNGTVNGGGVPHPQQQQHILGSP 239


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 901,150
Number of Sequences: 2352
Number of extensions: 17849
Number of successful extensions: 115
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)