Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0665
         (848 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl...    32   0.45 
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl...    32   0.45 
U97006-7|AAL08027.1|  107|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AF045638-7|AAQ91907.1|  242|Caenorhabditis elegans Hypothetical ...    29   4.2  
AF045638-6|AAO44909.1|  212|Caenorhabditis elegans Hypothetical ...    29   4.2  
AF045638-5|AAC02562.3|  544|Caenorhabditis elegans Hypothetical ...    29   4.2  
AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical ...    28   7.3  
Z81552-3|CAB04486.1|  470|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical pr...    28   9.6  
AL032636-2|CAA21603.1|  212|Caenorhabditis elegans Hypothetical ...    28   9.6  

>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform b protein.
          Length = 1590

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 23/67 (34%), Positives = 40/67 (59%)
 Frame = +1

Query: 436 IASLQSGNETNSRRRLNPLRHISNSTRHDLDQLTDNFLKMTELYFNKVKRPNKQRAGVSS 615
           IA+ +SGN+++S    +P R I + +    D    NF K  E++ + V + N +++G S 
Sbjct: 215 IANSESGNDSDSSEA-DP-RTIPSFSIPLPDTPPPNFAKRGEIHVD-VDQKNSKQSGESQ 271

Query: 616 SPFQRAR 636
           SP++RAR
Sbjct: 272 SPWERAR 278


>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
           methyltransferase-likeprotein 1, isoform a protein.
          Length = 1604

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 23/67 (34%), Positives = 40/67 (59%)
 Frame = +1

Query: 436 IASLQSGNETNSRRRLNPLRHISNSTRHDLDQLTDNFLKMTELYFNKVKRPNKQRAGVSS 615
           IA+ +SGN+++S    +P R I + +    D    NF K  E++ + V + N +++G S 
Sbjct: 229 IANSESGNDSDSSEA-DP-RTIPSFSIPLPDTPPPNFAKRGEIHVD-VDQKNSKQSGESQ 285

Query: 616 SPFQRAR 636
           SP++RAR
Sbjct: 286 SPWERAR 292


>U97006-7|AAL08027.1|  107|Caenorhabditis elegans Hypothetical
           protein C13F10.1b protein.
          Length = 107

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
 Frame = +3

Query: 39  VNENEVIESHCASTAIPPPSKVAPQCGKPANAAPTKRYLLS---IGRIFHKLTLVGSTIT 209
           ++ N+   S  A + + P   +  +C +      T R L       R+  K TL+   + 
Sbjct: 20  MSANQYKTSPTAFSFLSPALGLGTRCSRQTLLKHTARLLAHDTFSRRVVSKFTLLSPRL- 78

Query: 210 VTRYRPRHPYPPFNIXTVIVS 272
           V RYR RH +P  N+  + VS
Sbjct: 79  VGRYRARHLFPKVNLSKMQVS 99


>AF045638-7|AAQ91907.1|  242|Caenorhabditis elegans Hypothetical
           protein C35B1.2c protein.
          Length = 242

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 311 KPTTPRTCRGSVRGNDNGXYIEWRIWMSGSVS 216
           +P+T +T R  VR + +G + +W I+M  +VS
Sbjct: 117 EPSTSKTWRIFVRKDGSGMHFDWPIFMDSAVS 148


>AF045638-6|AAO44909.1|  212|Caenorhabditis elegans Hypothetical
           protein C35B1.2b protein.
          Length = 212

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 311 KPTTPRTCRGSVRGNDNGXYIEWRIWMSGSVS 216
           +P+T +T R  VR + +G + +W I+M  +VS
Sbjct: 117 EPSTSKTWRIFVRKDGSGMHFDWPIFMDSAVS 148


>AF045638-5|AAC02562.3|  544|Caenorhabditis elegans Hypothetical
           protein C35B1.2a protein.
          Length = 544

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = -1

Query: 311 KPTTPRTCRGSVRGNDNGXYIEWRIWMSGSVS 216
           +P+T +T R  VR + +G + +W I+M  +VS
Sbjct: 117 EPSTSKTWRIFVRKDGSGMHFDWPIFMDSAVS 148


>AC024136-6|AAF35965.3|  425|Caenorhabditis elegans Hypothetical
           protein F54A3.1 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = +3

Query: 90  PPSKVAPQCGKPANAAPTKR 149
           P S VAP+   PA+AAPT+R
Sbjct: 236 PSSAVAPRRAPPASAAPTRR 255


>Z81552-3|CAB04486.1|  470|Caenorhabditis elegans Hypothetical
           protein F56G4.4 protein.
          Length = 470

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 492 QWVESSSRICFVAGL*RGNSRVRNRQYFRGSTSAKSLSPRVQ 367
           QWV +  R C +  +  GN+R     + RG      L  R++
Sbjct: 4   QWVSTGKRFCDICKVWFGNNRASQDHHDRGERHKAMLQQRIR 45


>Z68507-7|CAA92830.1| 1646|Caenorhabditis elegans Hypothetical
           protein F11A10.4 protein.
          Length = 1646

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -1

Query: 593 LFGLLTLLKYNSVILRKLSVSWSKS*RVELDICRSGLSRLREF--VSLPDCREAIVESGT 420
           LF L  L K  S+ L +L V W K+    + +C      +R++  V+L    +  V+S T
Sbjct: 766 LFPLAVLYKVCSLSLMRLQVFWQKAANHFIKVCNHTSVSMRDWAAVALTSLAKHAVKSKT 825

Query: 419 ASISEAQ 399
           +  +++Q
Sbjct: 826 SMDAKSQ 832


>Z68297-7|CAA92597.1| 1646|Caenorhabditis elegans Hypothetical
           protein F11A10.4 protein.
          Length = 1646

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = -1

Query: 593 LFGLLTLLKYNSVILRKLSVSWSKS*RVELDICRSGLSRLREF--VSLPDCREAIVESGT 420
           LF L  L K  S+ L +L V W K+    + +C      +R++  V+L    +  V+S T
Sbjct: 766 LFPLAVLYKVCSLSLMRLQVFWQKAANHFIKVCNHTSVSMRDWAAVALTSLAKHAVKSKT 825

Query: 419 ASISEAQ 399
           +  +++Q
Sbjct: 826 SMDAKSQ 832


>AL032636-2|CAA21603.1|  212|Caenorhabditis elegans Hypothetical
           protein Y40B1B.5 protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +3

Query: 81  AIPPPSKVAPQCGKPANAAPTKRYLLSIGR 170
           A PPP K AP   K   AAPT   + S+GR
Sbjct: 31  APPPPQKAAPAAPKTLKAAPTFA-MESLGR 59


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,524,549
Number of Sequences: 27780
Number of extensions: 418528
Number of successful extensions: 1214
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)