Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0664
         (487 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    23   1.9  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   7.9  

>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = -3

Query: 347 SCPSEVWHERSSXVETPGTRVDGALSATLG 258
           SCP   W        TP  +  G LS + G
Sbjct: 172 SCPQVQWSATPQAGSTPTYQTQGLLSPSYG 201


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 197  VDH*SDLHISEXPTQLQPV 253
            ++  S++HIS+   QL+P+
Sbjct: 1308 IEETSEVHISKEYLQLEPI 1326


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 197  VDH*SDLHISEXPTQLQPV 253
            ++  S++HIS+   QL+P+
Sbjct: 1308 IEETSEVHISKEYLQLEPI 1326


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +1

Query: 52  KTCYFTKSIAS*ILLV*CSANNI 120
           K CYF + +   +L+V C   +I
Sbjct: 53  KKCYFLRMVLIDLLIVGCILKHI 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,557
Number of Sequences: 336
Number of extensions: 1299
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11315916
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)