Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0664
         (487 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein.         36   0.076
AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein.     36   0.076
AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible...    36   0.076
AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible...    36   0.076
AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein.             36   0.076
AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein.             36   0.076
AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein.     36   0.076

>BC150290-1|AAI50291.1| 2432|Homo sapiens NAV2 protein protein.
          Length = 2432

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 214 SSHQRXPNAAAAGQQPSVADRAPSTLVPGVSTNEDLSCQTS 336
           SSH++ P A++A   P ++D AP++L  G S++   +C TS
Sbjct: 306 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 345


>AJ488102-1|CAD32471.1| 2488|Homo sapiens steerin2 protein protein.
          Length = 2488

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 214 SSHQRXPNAAAAGQQPSVADRAPSTLVPGVSTNEDLSCQTS 336
           SSH++ P A++A   P ++D AP++L  G S++   +C TS
Sbjct: 329 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 368


>AF466144-1|AAL96480.1| 2432|Homo sapiens retinoic acid inducible in
           neuroblastoma cells RAINB1d protein.
          Length = 2432

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 214 SSHQRXPNAAAAGQQPSVADRAPSTLVPGVSTNEDLSCQTS 336
           SSH++ P A++A   P ++D AP++L  G S++   +C TS
Sbjct: 306 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 345


>AF466143-1|AAL96479.1| 2429|Homo sapiens retinoic acid inducible in
           neuroblastoma cells RAINB1 protein.
          Length = 2429

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 214 SSHQRXPNAAAAGQQPSVADRAPSTLVPGVSTNEDLSCQTS 336
           SSH++ P A++A   P ++D AP++L  G S++   +C TS
Sbjct: 306 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 345


>AB063116-1|BAC00854.1| 2429|Homo sapiens helicase protein.
          Length = 2429

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 214 SSHQRXPNAAAAGQQPSVADRAPSTLVPGVSTNEDLSCQTS 336
           SSH++ P A++A   P ++D AP++L  G S++   +C TS
Sbjct: 306 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 345


>AB063115-1|BAC00853.1| 2365|Homo sapiens helicase protein.
          Length = 2365

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 214 SSHQRXPNAAAAGQQPSVADRAPSTLVPGVSTNEDLSCQTS 336
           SSH++ P A++A   P ++D AP++L  G S++   +C TS
Sbjct: 242 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 281


>AB037840-1|BAA92657.3| 2464|Homo sapiens KIAA1419 protein protein.
          Length = 2464

 Score = 35.9 bits (79), Expect = 0.076
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 214 SSHQRXPNAAAAGQQPSVADRAPSTLVPGVSTNEDLSCQTS 336
           SSH++ P A++A   P ++D AP++L  G S++   +C TS
Sbjct: 338 SSHEKEPLASSASSHPGMSDNAPASLESG-SSSTPTNCSTS 377


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,586,135
Number of Sequences: 237096
Number of extensions: 938023
Number of successful extensions: 2272
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2238
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2272
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)