Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0664
         (487 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   0.99 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   0.99 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   7.0  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   7.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   7.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.0  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -2

Query: 348 FLPVGGLARKVLVXXDARHQGRWSPVSDTRLLTGCSCVGXSL 223
           F P   + RKV +   ++ QG  +  S     TGC     S+
Sbjct: 765 FQPDKNIRRKVTMGDKSKKQGSSAGTSSITKYTGCELTSESM 806


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 0.99
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = -2

Query: 348 FLPVGGLARKVLVXXDARHQGRWSPVSDTRLLTGCSCVGXSL 223
           F P   + RKV +   ++ QG  +  S     TGC     S+
Sbjct: 855 FQPDKNIRRKVTMGDKSKKQGSSAGTSSITKYTGCELTSESM 896


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 5   VSGRTWLTLSRTRKILKPVTSRRALR 82
           + G+T+    RT+K+ K   +  ALR
Sbjct: 70  IDGQTYEGKGRTKKMAKHAAAELALR 95


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 332 VWHERSSXVETPGTRVDG 279
           VW E  S   T G RV+G
Sbjct: 401 VWRETISSTATLGFRVEG 418


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 332 VWHERSSXVETPGTRVDG 279
           VW E  S   T G RV+G
Sbjct: 316 VWRETISSTATLGFRVEG 333


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 332 VWHERSSXVETPGTRVDG 279
           VW E  S   T G RV+G
Sbjct: 635 VWRETISSTATLGFRVEG 652


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,934
Number of Sequences: 438
Number of extensions: 1425
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)