Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0663
(788 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1214 + 24931142-24932314,24934177-24934434 54 1e-07
03_05_0618 + 26177743-26178420,26179477-26179617 54 1e-07
07_01_0353 + 2563807-2564496,2564595-2564660,2564853-2564918,256... 33 0.34
11_06_0598 - 25391923-25393197 32 0.60
07_01_0043 + 343777-343953,345198-346716,346831-346977,347378-34... 31 0.79
03_02_0199 - 6347980-6348225,6348300-6348341,6348824-6348978,634... 31 0.79
10_06_0171 + 11466934-11466990,11467073-11468312,11468450-114685... 31 1.0
11_06_0619 + 25574781-25574887,25575280-25575573,25575627-255757... 30 2.4
11_06_0286 + 21945699-21946213,21946255-21947542 30 2.4
06_02_0107 - 11904636-11904699,11904940-11905013,11905671-119058... 30 2.4
09_02_0286 - 6898041-6898144,6898881-6899005,6899158-6899207,689... 29 3.2
11_06_0291 + 22008412-22012284 29 4.2
07_03_0382 + 17470508-17470807,17471449-17474517 29 5.6
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 29 5.6
12_01_1007 - 10208034-10208165,10208376-10208480,10208612-102086... 28 7.4
10_01_0105 + 1287423-1289924 28 9.7
05_01_0498 + 4152729-4152820,4153316-4153425,4153840-4153877,415... 28 9.7
>07_03_1214 + 24931142-24932314,24934177-24934434
Length = 476
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/80 (37%), Positives = 44/80 (55%)
Frame = +2
Query: 269 SGCKKLAHLNLSGNKIKDLETLKPLEAXXXXXXXXXXXXXVTSIEDYKSKVFAMHPSLKY 448
+G L L+LS N+I+D+ L PL A VT ++DY+SKVF M +LKY
Sbjct: 94 AGLASLRDLDLSNNRIQDVGDLSPL-ANLRLVSLDLYECPVTRVKDYRSKVFGMIRTLKY 152
Query: 449 LDGFDKYDQXADDSDIEEED 508
LD D + +SD +++D
Sbjct: 153 LDKMDADENERPESDDDDDD 172
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 129 LTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRIS 251
+ + Y +L+ LS+ VG+ +L GFP L L +L LSDNRI+
Sbjct: 45 ILERYQSLEHLSIAGVGVASLAGFPRLRNLTRLTLSDNRIA 85
>03_05_0618 + 26177743-26178420,26179477-26179617
Length = 272
Score = 54.4 bits (125), Expect = 1e-07
Identities = 30/76 (39%), Positives = 40/76 (52%)
Frame = +2
Query: 284 LAHLNLSGNKIKDLETLKPLEAXXXXXXXXXXXXXVTSIEDYKSKVFAMHPSLKYLDGFD 463
L HL+L N+ D+ L PL A VT + Y+ KVFA+ PSLK+LDG D
Sbjct: 107 LRHLDLGNNRFADVAELAPL-APHGVESLDLYQCPVTKAKGYRDKVFALIPSLKFLDGMD 165
Query: 464 KYDQXADDSDIEEEDK 511
DSD EE+++
Sbjct: 166 AEGNDCLDSDDEEDEE 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/52 (40%), Positives = 30/52 (57%)
Frame = +3
Query: 129 LTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRISND*LFSVAAKS 284
L Y +L+ LS+ L++L G P LP LR+L L DNR+S + A+S
Sbjct: 51 LLGRYPSLEELSVAGARLSSLAGLPRLPALRRLSLPDNRLSGAASLAAVAES 102
>07_01_0353 +
2563807-2564496,2564595-2564660,2564853-2564918,
2565044-2565115,2565196-2565261,2565355-2565417,
2565505-2565570,2565963-2566062,2567403-2567504,
2567772-2567995,2568200-2568314,2568653-2568763,
2568873-2569088,2569426-2569624,2570690-2570790,
2570872-2570919,2571052-2571236,2571345-2571462,
2571572-2571699,2571981-2572107,2572529-2572647,
2572770-2572938,2573078-2573162,2573247-2573320,
2573449-2573568,2574068-2574251,2574343-2574464,
2574548-2574755,2574885-2574958,2575047-2575185,
2575275-2575456,2575852-2576007,2576153-2576284,
2576508-2576566,2576913-2576945,2577065-2577196,
2577303-2577479
Length = 1675
Score = 32.7 bits (71), Expect = 0.34
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +3
Query: 150 LQILSLNNVGLTTLKGFPTLPMLRKLELSDN 242
LQ+L+ + ++ LKGFP LP L L + DN
Sbjct: 340 LQVLAASRNKISVLKGFPHLPSLEHLRVEDN 370
>11_06_0598 - 25391923-25393197
Length = 424
Score = 31.9 bits (69), Expect = 0.60
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 75 HEVKELNLDNCRSTNI----VGLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELS 236
H +K L +D C TNI +G + + I S +++ L G LP L+KLEL+
Sbjct: 333 HHLKSLLVDGCDITNIDFVNIGAAPK-LEMIIWSFDSIDALPLSGIEHLPKLKKLELN 389
>07_01_0043 +
343777-343953,345198-346716,346831-346977,347378-347940
Length = 801
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +3
Query: 90 LNLDNCRSTNIVGLTDEYT--NLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRIS 251
L L N +IV +T L +LSL+ ++T++G L LR L++S NRIS
Sbjct: 555 LRLLNLSGNSIVRITAGALPRGLHMLSLSKNNISTIEGLRELTRLRLLDISYNRIS 610
>03_02_0199 -
6347980-6348225,6348300-6348341,6348824-6348978,
6349369-6349475,6349608-6349733,6349809-6349890,
6350057-6350130,6351184-6352631,6353391-6353540,
6353664-6353906,6354009-6354266,6355554-6356015
Length = 1130
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/59 (35%), Positives = 30/59 (50%)
Frame = +3
Query: 78 EVKELNLDNCRSTNIVGLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRISN 254
+++ L+L +I L++ + L L N LTTL G L L L+LS N ISN
Sbjct: 221 KLRNLDLGFNHLRSISSLSEACGRIVQLVLRNNALTTLHGIKNLKSLMDLDLSYNIISN 279
>10_06_0171 +
11466934-11466990,11467073-11468312,11468450-11468596,
11469650-11470140
Length = 644
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +2
Query: 266 LSGCKKLAHLNLSGNKIKDLETLKPL 343
LSGC L L L+GNKI D+E L L
Sbjct: 483 LSGCTALRELYLAGNKISDVEGLHRL 508
>11_06_0619 +
25574781-25574887,25575280-25575573,25575627-25575716,
25575776-25576256
Length = 323
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 90 LNLDNC----RSTNIVGLTDEYTNLQILSLNNVGLTTL-KGFPTLPMLRKLELSDNRISN 254
L+L+ C T++ + E T+L+ LSL N G+T L K L L L++ +S
Sbjct: 46 LDLEGCTGFEEETDLRTICTEATHLKYLSLRNTGVTQLPKHIQNLQQLETLDVRGTNVSK 105
Query: 255 D*LFSVAAKSLH 290
+ K LH
Sbjct: 106 LDVVLPMLKELH 117
>11_06_0286 + 21945699-21946213,21946255-21947542
Length = 600
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 81 VKELNLDNCRSTNIVGLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRISND 257
+K L ++ TNI L+ + L++ + ++ G LP ++LEL+++ + N+
Sbjct: 524 LKYLLIEGFNLTNITFEDGSACELEKMVLSSTSIESVSGVDVLPKFKELELNNSHVPNE 582
>06_02_0107 - 11904636-11904699,11904940-11905013,11905671-11905802,
11910309-11911018,11911110-11911852,11911936-11913753,
11914037-11914338
Length = 1280
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +3
Query: 99 DNCRS-TNIVGLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNR 245
DN + T+I+ L+ + L++ + +L+G LPML++LEL N+
Sbjct: 986 DNLKCMTDIIFEEGAAVELEKIVLSSTNVRSLRGVGRLPMLKELELKGNK 1035
>09_02_0286 -
6898041-6898144,6898881-6899005,6899158-6899207,
6899245-6899386,6899951-6900020,6900077-6900216,
6900291-6900365,6901083-6904723
Length = 1448
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/47 (36%), Positives = 27/47 (57%)
Frame = +3
Query: 150 LQILSLNNVGLTTLKGFPTLPMLRKLELSDNRISND*LFSVAAKSLH 290
L+ ++L+ GL GFP P LR L+LS NR+++ L + + H
Sbjct: 159 LRSVNLSRNGLAG-GGFPFAPSLRSLDLSRNRLADAGLLNYSFAGCH 204
>11_06_0291 + 22008412-22012284
Length = 1290
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +3
Query: 81 VKELNLDNCRSTNIVGLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRISND 257
+K L ++ TNI L+ + L++ + ++ G LP ++LEL+++ + N+
Sbjct: 1214 LKYLLIEGFNLTNITFENRSACELEKMVLSSTSIESISGVDRLPKFKELELNNSPVPNE 1272
>07_03_0382 + 17470508-17470807,17471449-17474517
Length = 1122
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 75 HEVKELNLDNCRSTNIV-GLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKL 227
H+VKEL+ NC S DE NL +L N+G+ ++ +PM K+
Sbjct: 318 HQVKELSFQNCWSLLCCNACLDE--NLHGNTLRNIGIMIIQKCKKIPMAVKI 367
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 266 LSGCKKLAHLNLSGNKIKDL 325
L+GC KL LNL GNK+ L
Sbjct: 156 LAGCSKLFRLNLEGNKLVTL 175
>12_01_1007 -
10208034-10208165,10208376-10208480,10208612-10208673,
10210820-10211456
Length = 311
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = -2
Query: 211 GSVGKPLSVVRPTLLRLSICKFVYSSVKPTMFVLLQL 101
GSV +P++ + T + LSI F+ SV T F +L +
Sbjct: 234 GSVPRPVARIGVTFVALSIALFLLKSVVSTAFFVLAM 270
>10_01_0105 + 1287423-1289924
Length = 833
Score = 27.9 bits (59), Expect = 9.7
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +3
Query: 111 STNIVGLT----DEYTNLQILSLNNVGLTTL--KGFPTLPMLRKLELSDNRISND-*LFS 269
S N++G+ + +T+L + L N ++ + +GF + L L LS NR+S L
Sbjct: 367 SNNMIGMLPSSIEHFTSLNHIDLTNNSVSGVMPRGFQNMANLEYLHLSSNRLSGQMPLLP 426
Query: 270 VAAKSLH 290
+ K LH
Sbjct: 427 TSLKILH 433
>05_01_0498 +
4152729-4152820,4153316-4153425,4153840-4153877,
4154335-4154433,4154461-4157475
Length = 1117
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 266 LSGCKKLAHLNLSGNKI 316
LS C +L HLNL GN +
Sbjct: 781 LSNCSRLTHLNLDGNSL 797
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,827,553
Number of Sequences: 37544
Number of extensions: 224935
Number of successful extensions: 784
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 784
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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