Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0663
         (788 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   0.87 
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            26   1.5  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.1  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 0.87
 Identities = 16/42 (38%), Positives = 26/42 (61%)
 Frame = +3

Query: 126 GLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRIS 251
           G+ + Y  L+++S NN+   T K F  LP L+ L ++ N+IS
Sbjct: 509 GMNNLY-GLRLIS-NNIENFTRKAFKDLPSLQILNVARNKIS 548



 Score = 23.4 bits (48), Expect = 8.1
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 147 NLQILSLNNVGLTTLKG--FPTLPMLRKLELSDNRISN 254
           NL++L L+   + +L    F +L  LR L +S NR+ +
Sbjct: 172 NLEVLDLSTNNIWSLPDHLFCSLSGLRSLNISSNRLQD 209


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.8 bits (54), Expect = 1.5
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +3

Query: 141 YTNLQILSLN-NVGLTTLKGFPTLPMLRKLELSDNRISN 254
           ++ LQ L LN N  L        +P+LR L+L +N ISN
Sbjct: 428 HSALQELHLNGNKLLQVPDALYDVPLLRTLDLGENHISN 466



 Score = 25.4 bits (53), Expect = 2.0
 Identities = 18/59 (30%), Positives = 31/59 (52%)
 Frame = +3

Query: 78  EVKELNLDNCRSTNIVGLTDEYTNLQILSLNNVGLTTLKGFPTLPMLRKLELSDNRISN 254
           ++ +  +DN       GL  + T+L++ S N +     + F  L  L +LELS NR++N
Sbjct: 216 DLPQNTIDNLPPAIFSGL-GKLTDLRLQS-NGLNYIADRAFEGLVSLSRLELSLNRLTN 272


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 11/41 (26%), Positives = 19/41 (46%)
 Frame = -3

Query: 360  RFLKASRGFRVSKSLILFPERFKCASFLQPLRKVSHLIFYC 238
            + L   R FR    +  F    +C +    +  V+H++FYC
Sbjct: 924  QILSGHRFFREFLHVCGFAPSPECPACTGSVESVAHVLFYC 964


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,017
Number of Sequences: 2352
Number of extensions: 10282
Number of successful extensions: 72
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82744797
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)