Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0662
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0042 - 21798255-21798871,21799400-21799777,21799861-218008...    31   1.2  
12_02_0349 - 17820352-17821238,17822976-17823363                       29   4.9  
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804...    29   4.9  

>05_05_0042 -
           21798255-21798871,21799400-21799777,21799861-21800820,
           21800918-21800957,21801471-21801766,21802696-21802774,
           21803013-21803100,21803189-21803273,21803364-21803625,
           21803720-21805027,21806187-21806393,21807288-21807519,
           21808267-21808353,21808427-21808735,21808879-21808957,
           21809788-21809867,21809952-21810029,21810744-21810831,
           21811102-21811241,21811342-21811415,21812043-21812125,
           21812403-21812516,21813975-21814136,21814377-21814641
          Length = 2036

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 20/76 (26%), Positives = 33/76 (43%)
 Frame = -2

Query: 778 KFXANLPNINAYNXPIRHSXAQLLXRANRCGPSSLLRQLAKGGCAARRLSXVTPGFSQSR 599
           K   + P       P+  + + +L R   C PS L+RQ+     +A  L    PGF+Q  
Sbjct: 347 KVLTHSPRSVGEGLPVIVAPSGMLGRLVGCCPSDLVRQVYSSKLSAATL----PGFTQPT 402

Query: 598 RCKTTAQ*IVIRLTIG 551
            C+   Q   + + +G
Sbjct: 403 MCQLRGQSYYVEVALG 418


>12_02_0349 - 17820352-17821238,17822976-17823363
          Length = 424

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 31/115 (26%), Positives = 49/115 (42%)
 Frame = -3

Query: 606 SHDVVKRRPSEL*YDSL*GELGTGPPLESHHTEGDKGSNYTVEVGHEIGALAKALDTQKQ 427
           +H+V    P+EL  D   G L  G    +   +  +      E+  E  A A+A + Q+Q
Sbjct: 190 AHEVFDDLPAELRRDGD-GALTVGRLAAALRAQRRELDAVRAELDGERRACAEAAEYQRQ 248

Query: 426 LAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKRFIT 262
           L E+  F    V     L+H+AE     E+  + +Q D  R +  H  D +   T
Sbjct: 249 LEEQGEFDREAVRLAMQLVHEAE----TEKHALQRQLDAFR-VKAHLYDYEAAAT 298


>01_01_1018 -
           8046819-8046876,8046995-8047212,8048099-8048177,
           8048455-8048540,8048698-8048983,8049063-8049205,
           8049308-8049508,8049626-8049754,8050463-8050738,
           8050823-8051098,8051364-8052364,8052452-8052634,
           8052865-8052937,8053205-8053313,8053622-8053785
          Length = 1093

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -3

Query: 390 TKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKRFITENT 253
           T N DL H A+I  YI  E    +   ++   GHTSD + F  E +
Sbjct: 269 TGNRDLYH-AQIHPYINGEHKRDRCIQMKEKLGHTSDHEGFSREKS 313


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,839,002
Number of Sequences: 37544
Number of extensions: 464733
Number of successful extensions: 980
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)