Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0661
         (848 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    25   0.76 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.3  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    21   9.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   9.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.3  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    21   9.3  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    21   9.3  

>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 25.0 bits (52), Expect = 0.76
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +2

Query: 2   VDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVY 136
           +D K E H+E+  A + E+R+  +   +G+  T   L    + VY
Sbjct: 178 IDEKAEEHKEQFTALVREIRNAFRH--DGLLLTMSVLPNVNSSVY 220


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -2

Query: 241 DLANLFLMFAQTLDHLLEVLVALVGSCG 158
           ++ NL+L     +  L++  + LV  CG
Sbjct: 263 EIDNLYLKHKLEISSLVQTAITLVAMCG 290


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 756 CCRKSFLN*NSCELLAAXGSVAIRLLA 836
           CCR+SFL   +  L        +RL A
Sbjct: 83  CCRESFLRERTITLTHCYDPDGVRLTA 109


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -2

Query: 349 VSLSAQLQ*ADVGRRPAAASPGWRSRAAGTS 257
           VSLS          RP  AS G R+R A TS
Sbjct: 64  VSLSENRSHEPEMERPKGASNGKRARTAYTS 94


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = -2

Query: 349 VSLSAQLQ*ADVGRRPAAASPGWRSRAAGTS 257
           VSLS          RP  AS G R+R A TS
Sbjct: 84  VSLSENRSHEPEMERPKGASNGKRARTAYTS 114


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 304 PAAASPGWRSRAAGTSPVA 248
           P+ +SP   S +A TSP A
Sbjct: 40  PSGSSPQHSSSSASTSPAA 58


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 304 PAAASPGWRSRAAGTSPVA 248
           P+ +SP   S +A TSP A
Sbjct: 40  PSGSSPQHSSSSASTSPAA 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,785
Number of Sequences: 336
Number of extensions: 2556
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)