Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0661
(848 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 32 0.089
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 32 0.089
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 31 0.21
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.27
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 0.63
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 29 0.63
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 29 1.1
SPBC146.03c |cut3|smc4, smc4|condensin subunit Cut3|Schizosaccha... 29 1.1
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 29 1.1
SPAC29B12.04 |snz1||pyridoxine biosynthesis protein|Schizosaccha... 29 1.1
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 28 1.5
SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogam... 28 1.5
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 28 1.9
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 28 1.9
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 27 2.5
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 2.5
SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex sub... 27 2.5
SPAC23H4.15 |||ribosome biogenesis protein Tsr1 |Schizosaccharom... 27 3.4
SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces ... 27 3.4
SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 4.4
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 27 4.4
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 26 5.9
SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase... 26 5.9
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 26 5.9
SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr 1|||... 26 7.8
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 26 7.8
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 32.3 bits (70), Expect = 0.089
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = +2
Query: 23 HEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDKMTTAADKRDENLKK 196
++E +EA +NE R L+ LEG ++ L++ Q + YK E + T ++ + NL
Sbjct: 17 NQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT--QEETETNLDD 74
Query: 197 MIERLREHEEQV 232
RL E E +V
Sbjct: 75 EYHRLGEREPKV 86
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 32.3 bits (70), Expect = 0.089
Identities = 28/149 (18%), Positives = 63/149 (42%)
Frame = +1
Query: 37 RGLHQRAALPSQGSS*GR*EDQVDPGTADRGSVQGHRR*DDHSCRQARREPQEDDRASAR 216
R ++A L ++ ++ E+Q ++ + + + +A+RE +E+ + A
Sbjct: 547 RKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAE 606
Query: 217 T*GTSSQGPRRQPEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAAT 396
+ + E ++ + +EK ++ A+ + EAE++ K E A
Sbjct: 607 EKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAK 666
Query: 397 AKVEEITKDIENKLTTAELNREKEIQKKL 483
+ EE K AE N ++E ++K+
Sbjct: 667 REAEEKAK------REAEENAKREAEEKV 689
Score = 29.1 bits (62), Expect = 0.83
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 2/105 (1%)
Frame = +1
Query: 172 QARREPQEDDRASART*GTSSQGPRRQPEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 351
+A+R+ +E R A + + E ++ + +EK ++ A+ + EAE+ K
Sbjct: 544 EAKRKAEEKARLEAEENAKREAEEQAKREAEEKAKREAEEKAKREAEEKAKREAEENAKR 603
Query: 352 RNHNIKLAEVRSAATAKVEEITK-DIENKL-TTAELNREKEIQKK 480
E A + EE K + E K AE ++E ++K
Sbjct: 604 EAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEK 648
Score = 28.7 bits (61), Expect = 1.1
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = +1
Query: 172 QARREPQEDDRASART*GTSSQGPRRQPEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 351
+A+RE +E + A + + E ++ + +EK ++ A+ + EAE+ K
Sbjct: 608 KAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKR 667
Query: 352 RNHNIKLAEVRSAATAKVEEITK--DIENKLTTAELNREKEIQK 477
E A + EE K EN AE ++E K
Sbjct: 668 EAEEKAKREAEENAKREAEEKVKRETEENAKRKAEEEGKREADK 711
Score = 27.1 bits (57), Expect = 3.4
Identities = 20/101 (19%), Positives = 40/101 (39%)
Frame = +1
Query: 172 QARREPQEDDRASART*GTSSQGPRRQPEKFQQLESAIQEKLQQAADRRLLIEAEQREKL 351
+A+RE +E + A + + E ++ + +EK ++ A+ EAE++ K
Sbjct: 616 KAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEEKAKREAEENAKREAEEKAKR 675
Query: 352 RNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQ 474
E + EE K + E ++ EI+
Sbjct: 676 EAEENAKREAEEKVKRETEENAKRKAEEEGKREADKNPEIK 716
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 31.1 bits (67), Expect = 0.21
Identities = 14/61 (22%), Positives = 30/61 (49%)
Frame = +2
Query: 65 RLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRKVR 244
RL + +++ + +T ++A E+KM D + L + ER+R E Q+ ++
Sbjct: 312 RLNNEKRAIQQKITQMTNETESFFQAKEEKMIETRDALNSELSEYHERIRALETQIESLK 371
Query: 245 A 247
+
Sbjct: 372 S 372
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 30.7 bits (66), Expect = 0.27
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 2 VDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 181
V++++ T EEK I LRS L D + VE + E + E+ K +ED A ++D
Sbjct: 994 VESEISTREEK----ITSLRSELLDLNKRVEVLKEEKESSSKELAKQLED----AVREKD 1045
Query: 182 ENL--KKMIERLREHEEQV 232
L KK E++R ++V
Sbjct: 1046 SALSFKKDYEKIRSDADRV 1064
Score = 28.7 bits (61), Expect = 1.1
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Frame = +1
Query: 259 KFQQLESAIQEKLQQAADRRLLIEAEQRE--KLRNHNIKLAEVRSAATAKVEEITKDIEN 432
+F L+ + K ++ + EA Q+E L++ N +L E +A++ E+ITK+
Sbjct: 1431 RFAHLKQELTNKNKELTSKNAENEAMQKEIESLKDSNHQLQE---SASSDAEQITKEQFE 1487
Query: 433 KLTTAELNREKEI 471
+L + + EKE+
Sbjct: 1488 QLKSEKERTEKEL 1500
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)
Frame = +1
Query: 325 IEAEQREKLRNHNIKLAEV------RSAATAKV-EEITKDIENKLTTAELNREKEIQKKL 483
+E + +E N ++KL +V RS A V E+ T+D++NK+T E E + K+L
Sbjct: 1648 VEEKLKENSANFDVKLKKVVAETEFRSKAKISVYEKKTRDLQNKITQLEETIE-NLNKQL 1706
Query: 484 DFVKKXERPPS 516
+K + S
Sbjct: 1707 SNPEKTDESTS 1717
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 8 AKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYKAIEDKMTTAADKRD 181
A+ E +E+ E +NE R+K+ E +K + T + + + +E+K+ + D
Sbjct: 1601 AEKEKTKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEKLKENSANFD 1660
Query: 182 ENLKKMI 202
LKK++
Sbjct: 1661 VKLKKVV 1667
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.5 bits (63), Expect = 0.63
Identities = 17/77 (22%), Positives = 44/77 (57%)
Frame = +2
Query: 2 VDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 181
++A +E K E + + + SR+K + +E TR L +Q ++ + E+K+ + +
Sbjct: 474 MNAIVEAESSKNELWDSMMVSRMKTQEQSIELTR--LYKQLQDIEEDYENKLM----RME 527
Query: 182 ENLKKMIERLREHEEQV 232
+ ++ +++L+E+ E++
Sbjct: 528 QQWREDVDQLQEYVEEI 544
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 29.5 bits (63), Expect = 0.63
Identities = 14/70 (20%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Frame = +2
Query: 17 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK---AIEDKMTTAADKRDEN 187
+ HEE + ELR++++++++ E+ ++ E+Y+ A+E ++ D + +
Sbjct: 101 KAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQKKTALEIDLSEKKDAYEYS 160
Query: 188 LKKMIERLRE 217
K+ +R+
Sbjct: 161 CNKLNSYMRQ 170
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/88 (23%), Positives = 39/88 (44%)
Frame = +1
Query: 256 EKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDIENK 435
E +Q+ S+I+ + A R + E E+ + + I+ + ++E D+E+K
Sbjct: 221 ESIKQVSSSIELEKINAEQRLQISELEKLKAAQEERIEKLSSNNRNVEILKEEKNDLESK 280
Query: 436 LTTAELNREKEIQKKLDFVKKXERPPSW 519
L E R+K +L+ K SW
Sbjct: 281 LYRFEEYRDKVATLELENEKIQTELNSW 308
>SPBC146.03c |cut3|smc4, smc4|condensin subunit
Cut3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1324
Score = 28.7 bits (61), Expect = 1.1
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +2
Query: 17 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKK 196
E +EE + + E +++K+ +KTR + EQQT + IE+++ +K ++ LKK
Sbjct: 402 EKNEEVKS--LREKAAKVKNDCTSEKKTRQSYEQQTVK----IEEQLKFLLNK-EKKLKK 454
Query: 197 MIERL 211
IE L
Sbjct: 455 SIEAL 459
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/56 (25%), Positives = 30/56 (53%)
Frame = +2
Query: 47 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLR 214
+N+L + L+D L G+E +RLT + + + A D + L++ +++L+
Sbjct: 494 VNDLIAELQDELRGIE-SRLTSVLSECNMLRETASEEKNAFDAESDKLERELQQLK 548
>SPAC29B12.04 |snz1||pyridoxine biosynthesis
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +3
Query: 495 EGGAAAELVRQNKSARTETAGP-ALLRLERGPSDTRLSRFTSQLSD 629
+GG ++V ++ E AG A++ LER P+D R +++SD
Sbjct: 20 KGGVIMDVVNAEQARIAEAAGACAVMALERVPADIRAQGGVARMSD 65
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 28.3 bits (60), Expect = 1.5
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 5 DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK-AIEDKMTTAADKRD 181
+ +++ +EK++ + + K + EK +L +QQ A+ K A E ++ +KR
Sbjct: 643 EQRLKREQEKKQQELERQKREEKQKQKEREK-KLKKQQQEADREKMAREQRLREEEEKRI 701
Query: 182 ENLKKMIERLREHEEQVRK 238
+K E+L + EE+ R+
Sbjct: 702 LEERKRREKLDKEEEERRR 720
>SPAC13C5.03 |tht1||nuclear membrane protein involved in karyogamy
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 543
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 322 LIEAEQREKLRNHN-IKLAEVRSAATAKVEEITKDIENKLTTAELNREKEIQKKLDFVKK 498
LIE + EK + N I L+ + + + K I+N +TT E + ++ +Q +DFV
Sbjct: 237 LIE-KLNEKFTSENAIALSAIGKYTSEFSAFMEKRIKNLITTTEDSLQQSVQSNIDFVNS 295
Query: 499 XERP 510
+P
Sbjct: 296 GFQP 299
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 EKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAK-VEEITKDIEN 432
++ QLE A+ EKL + + ++E ++ + N EV++ T V + + D+++
Sbjct: 1089 KRVDQLEEALNEKLARLVGEQ-MVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQD 1147
Query: 433 KLTT 444
+L T
Sbjct: 1148 QLAT 1151
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.9 bits (59), Expect = 1.9
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 256 EKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAK-VEEITKDIEN 432
++ QLE A+ EKL + + ++E ++ + N EV++ T V + + D+++
Sbjct: 1089 KRVDQLEEALNEKLARLVGEQ-MVEGDKEKDKTNEEKNKDEVKAEMTQPVVNQDSHDLQD 1147
Query: 433 KLTT 444
+L T
Sbjct: 1148 QLAT 1151
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 241 PRRQPEKFQQLESAIQEKLQQAADRRLL----IEAEQREKLRNHNI 366
PR P K Q+L+ + ++LQ D RLL IEAE E ++++
Sbjct: 201 PRESPSKIQRLQDVLLKQLQ---DTRLLISQVIEAENSEDFSSNSL 243
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/79 (17%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Frame = +2
Query: 11 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE--DKMTTAADKRDE 184
K+++ ++++ INEL R+K + V + T+++ ++ E +++ A +D
Sbjct: 535 KIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAFQYKDN 594
Query: 185 NLKKMIERLREHEEQVRKV 241
+L++ E + + +++ +++
Sbjct: 595 DLRRFHESINKLQDREKEL 613
>SPBC29A10.03c |rlf2|SPBC365.19c|chromatin remodeling complex
subunit Rlf2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 92 EKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQVRK 238
E+ + E+Q E K + ++ AA K E K ER+R E+Q RK
Sbjct: 96 ERLKREKERQQREQEKKLREQEKIAAKKMKELEKLEKERIRLQEQQRRK 144
>SPAC23H4.15 |||ribosome biogenesis protein Tsr1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Frame = +1
Query: 274 ESAIQEKLQQAADRRLLIEAEQREKLRNH----NIKLAEVRSAATAKVE---EITKDIEN 432
E ++ D ++IE + +++ NH I E + AK E +++++ E
Sbjct: 396 EDEESDQYSDVEDTEVIIEDQDNQEISNHVAEEKIDSDEEETIDDAKSEMFVDLSEEEEV 455
Query: 433 KLTTAELNREKEIQKKLDFVKKXERPPS 516
+ ++KE+Q++L+F + E P+
Sbjct: 456 RQYEEYRKKQKELQEELEFPDEVELQPN 483
>SPAC8C9.07 |||rRNA processing protein Fyv7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 144
Score = 27.1 bits (57), Expect = 3.4
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 86 GVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKM--IERLREHEEQVRKV 241
G K + + + E+Y+ E+K +K D ++K IE+ ++ EQ R +
Sbjct: 64 GERKRKFSKKSHLQELYERSEEKRRIQQEKEDAKVQKRLEIEKKQKDREQTRNM 117
>SPBC13E7.07 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 232 SQGPRRQPEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAE 378
S G ++ E + + Q+K +A + + L + EQR +L H +L E
Sbjct: 189 SYGKKKSTEPLTKRQRQNQQKKLRAKEMQELADEEQRRRLAAHRKELHE 237
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2
Query: 113 EQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEEQ 229
E + AE K I D+ ++K DE L+ + ERLRE EE+
Sbjct: 169 ENRRAESNK-IMDETIQKSEKIDELLQYIEERLRELEEE 206
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/74 (22%), Positives = 37/74 (50%)
Frame = +2
Query: 20 THEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKM 199
T E +RE + + + +++ E + +TR+ LE+Q V IED A ++ ++ +
Sbjct: 456 TSESERE--LEKKKEQVEKKQEELMQTRIVLEEQVFLVENMIED---AKAKRKFSEVETL 510
Query: 200 IERLREHEEQVRKV 241
+ L E++ +
Sbjct: 511 LSSLAPLHEEIHSI 524
>SPACUNK12.02c |cmk1||calcium/calmodulin-dependent protein kinase
Cmk1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 397 AKVEEITKDIENKLTTAELNREKEIQKKLDFVK 495
A V E NK+ A++ +K ++KK DFVK
Sbjct: 43 ATVREAVHIETNKMYAAKIMNKKMMEKKQDFVK 75
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 26.2 bits (55), Expect = 5.9
Identities = 16/39 (41%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2
Query: 128 EVYKAIED-KMTTAADKRDENLKKMIERLREHEEQVRKV 241
E+ KA+E+ K+T DENLKK I+ L E+ +K+
Sbjct: 35 ELVKALENVKLTKFTGDGDENLKKNIKVLVPVNEKPQKL 73
>SPAC144.01 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 112
Score = 25.8 bits (54), Expect = 7.8
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 292 KLQQAADRRLLIEAEQR--EKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNREK 465
K ++ + + L++ +QR EK +N NI + T E+I + I K T + R++
Sbjct: 35 KKERPFEPKKLVQQQQRLKEKKKNENIIYLKKTMRVTPSEEKIHEMINQKRETKKRKRKQ 94
Query: 466 EIQKKLDF 489
+ + D+
Sbjct: 95 KKKNDDDY 102
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 25.8 bits (54), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +1
Query: 259 KFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKD 423
K + E I +++ + R+L + +QRE+ R I R + KV E T+D
Sbjct: 126 KVRWREILIADEVARRRARQLDLANQQREQARQDEIARERKRRVESEKVWEETRD 180
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,642,955
Number of Sequences: 5004
Number of extensions: 43405
Number of successful extensions: 243
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 216
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 236
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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