Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0661
         (848 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    29   0.14 
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    26   1.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   1.7  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        26   1.7  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   2.2  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    25   2.9  
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   3.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            24   5.1  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    24   5.1  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   5.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.7  
AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.          24   6.7  

>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 29.5 bits (63), Expect = 0.14
 Identities = 22/84 (26%), Positives = 37/84 (44%)
 Frame = +2

Query: 2   VDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 181
           +D+  ++  +   A     +SRLK   E   K    +  +T E     E+ +  A     
Sbjct: 126 IDSGRKSFRKSTAAKTAATQSRLKQRFEAERKRTRVI--RTEEYIPTQEELLEEAEITER 183

Query: 182 ENLKKMIERLREHEEQVRKVRAGN 253
           EN+K + ER R  E + +K+R  N
Sbjct: 184 ENIKSL-ERFRRMELEKQKIRPTN 206


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 10/94 (10%)
 Frame = +1

Query: 253  PEKFQQLESAIQEKLQ---------QAADRRLLIEAEQREKLRNHNIKLAEVRSAATAK- 402
            PEK + LE+ + E  Q          A  + +    EQ  ++ N  +K+ + +     K 
Sbjct: 849  PEKVRALEAKVAECKQAFDSSSTKADAMQKNVDRYTEQINEITNSKVKVLQTKINGLGKQ 908

Query: 403  VEEITKDIENKLTTAELNREKEIQKKLDFVKKXE 504
            +++++ +I +KLT      E+ +QK  D +   E
Sbjct: 909  IDKLSANI-SKLTVEIKTSERNVQKSKDKINSME 941


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 15/76 (19%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = +1

Query: 283 IQEKLQQAADRRLLIEAEQ-REKLRNHNIKLAEVRSAATAKVEEITKDIENKLTTAELNR 459
           ++++L Q + ++   E E+  +K+      + E R   T    ++ KD++ K+   + +R
Sbjct: 727 LKQRLAQTSFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAKV-KDLQAKIADGKGHR 785

Query: 460 EKEIQKKLDFVKKXER 507
           E+E++   + +K+ ++
Sbjct: 786 ERELKSAEEDLKRSKK 801


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 22/89 (24%), Positives = 37/89 (41%)
 Frame = +1

Query: 247 RQPEKFQQLESAIQEKLQQAADRRLLIEAEQREKLRNHNIKLAEVRSAATAKVEEITKDI 426
           ++ E   Q E   +E L+  + +         + +R+   K AE      AKVEE  +  
Sbjct: 96  KETEVLCQQEREFREYLRNGSKKMTSTWENTVQNIRDK--KEAERLRRDKAKVEEDQRHY 153

Query: 427 ENKLTTAELNREKEIQKKLDFVKKXERPP 513
                  E+ R + IQK  D ++K +  P
Sbjct: 154 RELKAADEIKRRELIQKAEDLIQKDKVGP 182


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/65 (20%), Positives = 37/65 (56%)
 Frame = +2

Query: 47  INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLREHEE 226
           ++EL+   +   E +++    L    A+  + +++ MT    +R +++KK+ + L  +E+
Sbjct: 707 MDELKRHTQQRREQLQRELNELNSAYAKEDERLQE-MTRKLHQRQQHMKKLQQELLTNEQ 765

Query: 227 QVRKV 241
           Q++++
Sbjct: 766 QLQQL 770


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
 Frame = +1

Query: 172 QARREPQEDDRASART*GTSSQGPRRQPEKFQQLESAIQEKL--QQAADRRLLIEAEQRE 345
           + R+E +  +   A+T G +S G R + ++  Q E  +  ++  QQ  ++R  +E +QR+
Sbjct: 134 ELRKEKELFNALLAQTLGGTS-GARLESQQELQREQELLRRMESQQRQEQRQQLEDQQRQ 192

Query: 346 KLRNHNIK 369
           + R    K
Sbjct: 193 RWRQQQQK 200


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 14/51 (27%), Positives = 23/51 (45%)
 Frame = +2

Query: 5   DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKM 157
           DAK++ HE+ R     E+    K  + GV    + + Q T + Y     K+
Sbjct: 496 DAKIDKHEDARRKKKQEVVELFKLEVPGVYDRMINMCQPTHKRYNVAVTKV 546


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 778  FRKLLRQHN-SHHVRFTLSVVXLIRKGV 698
            F   + QH  SHH++  LS     RKG+
Sbjct: 2356 FNDFIHQHRYSHHLKLMLSKAISARKGL 2383


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 234 ARSAPATGEVPAARERHPGEAAA 302
           A +APAT EVP A   +P   +A
Sbjct: 266 AAAAPATAEVPGAVVANPAATSA 288


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 31  KTRGLHQRAA-LPSQGSS*GR*EDQVDPGTADRGSVQ 138
           +TR + +R   LP +G+  G       PGT DR S+Q
Sbjct: 2   ETRSMRKRTTRLPEEGAPTG-----AGPGTGDRASIQ 33


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 11/28 (39%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -2

Query: 778  FRKLLRQHN-SHHVRFTLSVVXLIRKGV 698
            F   + QH  SHH++  LS     RKG+
Sbjct: 2346 FSDFIHQHRYSHHLKLMLSKAISARKGL 2373


>AF042732-2|AAC18057.1|  179|Anopheles gambiae TU37B2 protein.
          Length = 179

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +2

Query: 110 LEQQTAEVYKAIEDKMTTAADKRDENLKKMIERLRE 217
           L+ +  +  K +E +  T  +  D+N KK IER  E
Sbjct: 36  LKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEE 71


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,277
Number of Sequences: 2352
Number of extensions: 11455
Number of successful extensions: 48
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90132318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)