Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0660
         (874 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation facto...    32   0.007
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   9.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   9.6  

>AY819656-1|AAV70656.1|   56|Tribolium castaneum elongation factor
           1-alpha protein.
          Length = 56

 Score = 31.9 bits (69), Expect = 0.007
 Identities = 15/24 (62%), Positives = 17/24 (70%)
 Frame = +3

Query: 801 QIRGIGTVXVGXXXMGVLKPGTMV 872
           +I GIGTV VG    GVLKPG +V
Sbjct: 6   KIGGIGTVPVGRVETGVLKPGMVV 29


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 575 MYEDTSFLISSNLGSLYGGSVESFCLLL 492
           ++ D S ++   LG  Y G    +CLL+
Sbjct: 262 LWVDLSHMMQQ-LGKAYSGMYSMYCLLI 288


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -3

Query: 575 MYEDTSFLISSNLGSLYGGSVESFCLLL 492
           ++ D S ++   LG  Y G    +CLL+
Sbjct: 262 LWVDLSHMMQQ-LGKAYSGMYSMYCLLI 288


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,601
Number of Sequences: 336
Number of extensions: 4223
Number of successful extensions: 9
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)