Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0659
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              23   3.0  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 688 GRRXSNVLLLHGHRCXSSAGRDRSRLGQSLPHSAGITSLHNRLTV 554
           G+  +N   LH   C S +   +SRL + L H   I + H R T+
Sbjct: 122 GKIYANHCELHRAACHSGSSLTKSRLMRCLHHD--IENAHIRRTL 164


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 6.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 428 VVENDINAGSSHYIIGPFQNKSYETVVV 511
           +  N +   S+   I PF+N+S   V+V
Sbjct: 256 ISRNGVRLSSARAFITPFENRSNLHVIV 283


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,503
Number of Sequences: 438
Number of extensions: 4366
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)