Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0659
         (737 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g66055.2 68418.m08322 ankyrin repeat protein / AKRP (AKR) ide...    28   5.6  
At5g66055.1 68418.m08321 ankyrin repeat protein / AKRP (AKR) ide...    28   5.6  
At4g31430.2 68417.m04465 expressed protein                             27   9.8  
At4g31430.1 68417.m04464 expressed protein                             27   9.8  

>At5g66055.2 68418.m08322 ankyrin repeat protein / AKRP (AKR)
           identical to ankyrin repeat protein (AKRP) [Arabidopsis
           thaliana] SWISS-PROT:Q05753
          Length = 359

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 717 EEAHPXVLDEEGAGLMSFCXMVTAA 643
           E A+P VLD+EGA LM +     +A
Sbjct: 315 ESANPFVLDDEGATLMHYAVQTASA 339


>At5g66055.1 68418.m08321 ankyrin repeat protein / AKRP (AKR)
           identical to ankyrin repeat protein (AKRP) [Arabidopsis
           thaliana] SWISS-PROT:Q05753
          Length = 435

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 717 EEAHPXVLDEEGAGLMSFCXMVTAA 643
           E A+P VLD+EGA LM +     +A
Sbjct: 315 ESANPFVLDDEGATLMHYAVQTASA 339


>At4g31430.2 68417.m04465 expressed protein
          Length = 574

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -2

Query: 664 LLHGHRCXSSA-GRDRSRLGQSLPHSAGITSLHNRLTVPSQSNRQTVTL 521
           +L G+    +A G  R+   ++LP+SA  TS HN+ T  +Q+ ++T  L
Sbjct: 312 MLKGNASSLNADGAVRNEQSRALPNSAIPTSEHNQTTEANQAVKETGVL 360


>At4g31430.1 68417.m04464 expressed protein
          Length = 485

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
 Frame = -2

Query: 664 LLHGHRCXSSA-GRDRSRLGQSLPHSAGITSLHNRLTVPSQSNRQTVTL 521
           +L G+    +A G  R+   ++LP+SA  TS HN+ T  +Q+ ++T  L
Sbjct: 312 MLKGNASSLNADGAVRNEQSRALPNSAIPTSEHNQTTEANQAVKETGVL 360


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,467,108
Number of Sequences: 28952
Number of extensions: 352487
Number of successful extensions: 980
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 980
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)