Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0658
(748 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4) 38 0.011
SB_47253| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_40022| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_28768| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_15711| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_3184| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_57385| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_52963| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_50350| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_49656| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_31920| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_28366| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8) 37 0.015
SB_25308| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_24745| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_2618| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_54119| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.020
SB_34064| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_28521| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30) 30 1.7
SB_34332| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_53316| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_10526| Best HMM Match : CUE (HMM E-Value=6.5) 28 7.0
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -2
Query: 594 NRYGPPSGFPLTST*PGIVHHLSGPSICA 508
NRY PP FPL S GIVHHLSGP+ CA
Sbjct: 1 NRYEPPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 44.0 bits (99), Expect = 1e-04
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = -1
Query: 595 ESLRSSIRVSPDFDLTRHSSPSFGSQHLCQSAPSFTDWKRDASGVRKSRT*L--DNFILP 422
ESLR+S RVS F L RHSSPSFGSQ + S+++ + G R L
Sbjct: 35 ESLRASTRVSSGFTLFRHSSPSFGSQQM----RSYSNLSKSRIGRSMMRLFFVEKGSHLS 90
Query: 421 ERTSSVRLHFRYAFQF 374
+R+ RLHF YA +F
Sbjct: 91 DRS---RLHFHYASEF 103
>SB_13940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/29 (62%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++L +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSLDHSKTRTHVRLLGPCFKTG 45
>SB_55151| Best HMM Match : Adeno_shaft (HMM E-Value=6.4)
Length = 402
Score = 37.5 bits (83), Expect = 0.011
Identities = 17/29 (58%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F + ++ +S TRTH RLLGPC+KTG
Sbjct: 247 AFTFISPRSFDHSKTRTHVRLLGPCFKTG 275
>SB_47253| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_40022| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_28768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_17596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_15711| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_3184| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_57385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_52963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_50350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 183
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_49656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 292
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 141 AFTFITPRSFGHSKTRTHVRLLGPCFKTG 169
>SB_31920| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_28366| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_26769| Best HMM Match : Popeye (HMM E-Value=1.8)
Length = 411
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 260 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 288
>SB_25308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_24745| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_2618| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 37.1 bits (82), Expect = 0.015
Identities = 17/29 (58%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Frame = -1
Query: 385 AFQF-NVKNL*NSMTRTHARLLGPCYKTG 302
AF F ++ +S TRTH RLLGPC+KTG
Sbjct: 17 AFTFITPRSFDHSKTRTHVRLLGPCFKTG 45
>SB_54119| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = -1
Query: 355 NSMTRTHARLLGPCYKTG 302
+S TRTH RLLGPC+KTG
Sbjct: 28 HSKTRTHVRLLGPCFKTG 45
>SB_34064| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 425
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -1
Query: 355 NSMTRTHARLLGPCYKT 305
+S TRTH RLLGPC+KT
Sbjct: 352 HSETRTHVRLLGPCFKT 368
>SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.25
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -2
Query: 594 NRYGPPSGFPLTST*PGIVHH 532
NRY PP FPL S GIVHH
Sbjct: 1 NRYEPPPEFPLASPYSGIVHH 21
>SB_28521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 31.9 bits (69), Expect = 0.57
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +3
Query: 291 ALAGPVL*HGPRSLACVRVIE 353
A + P L HGPRSL CVRV E
Sbjct: 61 ASSDPCLKHGPRSLTCVRVFE 81
>SB_38040| Best HMM Match : F5_F8_type_C (HMM E-Value=8.4e-30)
Length = 351
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +3
Query: 414 VRSGRMKLSSYVRDFRTPEASRFQSVNEGALWHKCWDPK 530
+ G+M SSY+ + P +R + + A+ + CW PK
Sbjct: 211 ITEGQMTASSYLEKYGMPSLARLNNKHIPAVTNGCWVPK 249
>SB_34332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 67
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +2
Query: 302 TRLVTRTKESSMCAS 346
TRL TRTKES+MCAS
Sbjct: 35 TRLETRTKESNMCAS 49
>SB_53316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +1
Query: 466 PRRLVSNQ*MKARSGTNA--GTRKMVNYAWSGRSQGKP*WRTVAI 594
P R +++ +KAR G++ GT+++++Y WS ++ P R +I
Sbjct: 181 PLREMAHLLLKARKGSSITHGTQRLIDYPWSAKAHRLPTARKCSI 225
>SB_10526| Best HMM Match : CUE (HMM E-Value=6.5)
Length = 281
Score = 28.3 bits (60), Expect = 7.0
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -1
Query: 421 ERTSSVRLHFRYAFQFNVKNL*NSMTRTHARLLGPCYK 308
+R+S +RLH R +KN +++TR +LL P +K
Sbjct: 235 QRSSDLRLHSRKQPDIPIKNQLSNITRLLEQLLNPDHK 272
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,937,260
Number of Sequences: 59808
Number of extensions: 425534
Number of successful extensions: 897
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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