Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0658
         (748 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane trans...    60   1e-08
AM279487-1|CAK50606.1|  109|Homo sapiens immunoglobulin A heavy ...    31   5.8  

>AJ276485-1|CAB81951.1|  283|Homo sapiens integral membrane
           transporter protein protein.
          Length = 283

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +1

Query: 532 MVNYAWSGRSQGKP*WRTVAILTCKSIVXTGYRG 633
           MVNYAW+GRSQ K  WR+VA+LTCKS+V  GYRG
Sbjct: 1   MVNYAWAGRSQRKLWWRSVAVLTCKSVVRPGYRG 34


>AM279487-1|CAK50606.1|  109|Homo sapiens immunoglobulin A heavy
           chain variable region protein.
          Length = 109

 Score = 30.7 bits (66), Expect = 5.8
 Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
 Frame = +3

Query: 429 MKLSSYVRDFRTPEASRF---QSVNEGALWHKCWDPKDGELCLVRSKSGE-TLMEDRS 590
           +K+S  V  +  PE S     Q+  +G  W    DP+DGE    +   G  T+ EDRS
Sbjct: 3   VKVSCKVSGYTLPELSMLWVRQAPGKGLEWMGGLDPEDGETIYAQKFQGRVTMTEDRS 60


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,715,105
Number of Sequences: 237096
Number of extensions: 1783865
Number of successful extensions: 3309
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3309
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)