Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0657
(698 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 82 5e-16
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 76 2e-14
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 4e-14
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32) 74 1e-13
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 66 2e-11
SB_42786| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.51
SB_17224| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_15557| Best HMM Match : Cu_amine_oxid (HMM E-Value=0) 31 1.2
SB_48652| Best HMM Match : RVT_1 (HMM E-Value=0.0009) 30 1.6
SB_46531| Best HMM Match : Cu_amine_oxid (HMM E-Value=0) 30 1.6
SB_31994| Best HMM Match : CPSase_L_chain (HMM E-Value=0) 29 3.6
SB_39226| Best HMM Match : bZIP_1 (HMM E-Value=4.9) 29 3.6
SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_25305| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 81.8 bits (193), Expect = 5e-16
Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 3/84 (3%)
Frame = +2
Query: 236 PRCQVHVAVGGWA--EGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAA 409
P+ + +AVGGW E S +S MVA K R FI+S ++ L+ + FDGLDLDWEYPG
Sbjct: 89 PKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTHGFDGLDLDWEYPGM- 147
Query: 410 DRGGS-FSDKDKFLYFVQELKRAF 478
RGGS SDK +F +EL+ AF
Sbjct: 148 -RGGSPKSDKGRFTLLCRELREAF 170
Score = 81.0 bits (191), Expect = 8e-16
Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +2
Query: 236 PRCQVHVAVGGWA--EGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAA 409
P+ + +AVGGW E S +S MVA K R FI+S ++ L+ FDGLDLDWEYPG
Sbjct: 474 PKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTNGFDGLDLDWEYPGM- 532
Query: 410 DRGGS-FSDKDKFLYFVQELKRAF 478
RGGS SDK +F QEL+ AF
Sbjct: 533 -RGGSPKSDKGRFTLLCQELRDAF 555
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/79 (32%), Positives = 48/79 (60%)
Frame = +3
Query: 36 CYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRNF 215
CY++NW+ YRP G + EDI LCTH+++SF V + + ++ I + + D ++
Sbjct: 25 CYYTNWSQYRPKGGTFWPEDIDPFLCTHILFSFAKVNQTTHKLDIYE---ENDHELYQRI 81
Query: 216 TSLRSKHPDVKFMSRLAVG 272
+L+ +P +K +++AVG
Sbjct: 82 NALKKINPKLK--TQIAVG 98
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/80 (36%), Positives = 48/80 (60%)
Frame = +3
Query: 33 VCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRN 212
VCY++NW+ YRP G + EDI LCTH+I+SF V ++ V+ + D D ++
Sbjct: 409 VCYYTNWSQYRPKGGTFWPEDIDPHLCTHVIHSFSKV-NLTTHVMEKYEKNDFDL--YKR 465
Query: 213 FTSLRSKHPDVKFMSRLAVG 272
+L+ +P +K +++AVG
Sbjct: 466 INALKKINPKLK--TQIAVG 483
>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 270
Score = 76.2 bits (179), Expect = 2e-14
Identities = 42/91 (46%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Frame = +2
Query: 230 QTPRCQVHVAVGGW--AEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPG 403
+ P + +AVGGW S +S MV +TR FI SV+ L+ + FDGLDLDWEYP
Sbjct: 84 KNPELKTLLAVGGWNHENANSPFSRMVKTAATRKVFIDSVIRILRTWGFDGLDLDWEYP- 142
Query: 404 AADRGGS-FSDKDKFLYFVQELKRAFIRAGR 493
A RGGS DK +F QEL FI G+
Sbjct: 143 -ATRGGSPPEDKQRFTVLCQELMNTFIAEGK 172
Score = 66.9 bits (156), Expect = 1e-11
Identities = 34/80 (42%), Positives = 51/80 (63%)
Frame = +3
Query: 33 VCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRN 212
VCY +NW+ YR G ++ EDIP DLCTHL+YSF + +K+ + E + DK +
Sbjct: 22 VCYHTNWSQYRQGRAKFWPEDIPADLCTHLMYSFAKINQKNELAMY---EWNDDKL-YPR 77
Query: 213 FTSLRSKHPDVKFMSRLAVG 272
F +L+ K+P++K + LAVG
Sbjct: 78 FNALKQKNPELKTL--LAVG 95
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 75.4 bits (177), Expect = 4e-14
Identities = 44/90 (48%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Frame = +2
Query: 227 LQTPRCQVHVAVGGWA-EGG--SKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEY 397
L+ P + +AVGGW E G S +S MVA KS R +FI S++ KYDFDG DLDWEY
Sbjct: 463 LKNPSLKTLLAVGGWNHESGPVSPFSQMVASKSNRTTFISSLLQLSDKYDFDGFDLDWEY 522
Query: 398 PGAADRGGS-FSDKDKFLYFVQELKRAFIR 484
P A RG S DK F +E+ AF R
Sbjct: 523 P--ASRGNSPPQDKQHFTILCEEMLDAFKR 550
Score = 52.0 bits (119), Expect = 4e-07
Identities = 27/80 (33%), Positives = 46/80 (57%)
Frame = +3
Query: 33 VCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIIDPELDVDKSGFRN 212
VCYF+NWA YRP ++ +DI LCTH++Y+F + ++++ + D ++
Sbjct: 401 VCYFTNWAQYRPDPVKFLPKDIDPLLCTHIVYAFAKIDPATNKIGTYEWN---DDRLYKE 457
Query: 213 FTSLRSKHPDVKFMSRLAVG 272
L+ K+P +K + LAVG
Sbjct: 458 INDLKLKNPSLKTL--LAVG 475
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/75 (49%), Positives = 44/75 (58%)
Frame = +2
Query: 254 VAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADRGGSFSD 433
+AVGGW G + MV+ S R FI + FL+ + FDGLDLDWEYPGA RG D
Sbjct: 94 LAVGGWNMGSGPFQDMVSTASRRKIFIDDAILFLRNHMFDGLDLDWEYPGA--RGSPPED 151
Query: 434 KDKFLYFVQELKRAF 478
K +F QEL AF
Sbjct: 152 KHRFTLLCQELLAAF 166
Score = 48.0 bits (109), Expect = 7e-06
Identities = 18/48 (37%), Positives = 33/48 (68%)
Frame = +3
Query: 33 VCYFSNWAVYRPGVGRYGIEDIPVDLCTHLIYSFIGVTEKSSEVLIID 176
VCY++NWA YR G+ +Y ++I LCTH++Y+F + +S++ + +
Sbjct: 25 VCYYTNWAQYR-GLAKYTPDNIDPSLCTHIVYAFAKMNADNSKLAMFE 71
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 469 EGVHQSR*RMGADSAVPLANFRLMEGYHVPELCQXLDAIHVMSYDLRGN 615
E + + R+ +AV + GY + L Q LD I++MSYDL G+
Sbjct: 169 EAANTGKPRLLLTAAVSAGETTVKNGYEISALGQALDWINLMSYDLHGD 217
>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
Length = 561
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/75 (49%), Positives = 44/75 (58%)
Frame = +2
Query: 254 VAVGGWAEGGSKYSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYPGAADRGGSFSD 433
+AVGGW G + MV+ S R FI + FL+ + FDGLDLDWEYPGA RG D
Sbjct: 18 LAVGGWNMGSGPFQDMVSTASRRKIFIDDAILFLRNHMFDGLDLDWEYPGA--RGSPPED 75
Query: 434 KDKFLYFVQELKRAF 478
K +F QEL AF
Sbjct: 76 KHRFTLLCQELLAAF 90
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 469 EGVHQSR*RMGADSAVPLANFRLMEGYHVPELCQXLDAIHVMSYDLRGN 615
E + + R+ +AV + GY + L Q LD I++MSYDL G+
Sbjct: 93 EAANTGKPRLLLTAAVSAGETTVKNGYEISALGQALDWINLMSYDLHGD 141
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 66.5 bits (155), Expect = 2e-11
Identities = 38/87 (43%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Frame = +2
Query: 227 LQTPRCQVHVAVGGWAEGGSK--YSHMVAQKSTRMSFIRSVVDFLKKYDFDGLDLDWEYP 400
L+ P + +AVGGW K +S MV ++R FI S + L++++FDG DLDWEYP
Sbjct: 195 LKNPGLKTLLAVGGWNHENYKSPFSRMVRTAASRKVFIDSSIAMLRQWNFDGFDLDWEYP 254
Query: 401 GAADRGGSF-SDKDKFLYFVQELKRAF 478
G +R GS DK +F QEL AF
Sbjct: 255 G--NRVGSDPGDKQRFTILCQELLDAF 279
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 469 EGVHQSR*RMGADSAVPLANFRLMEGYHVPELCQXLDAIHVMSYDLRG 612
E +R R+ +AV + + Y V ++ Q LD I++M+YDLRG
Sbjct: 282 EAAQTNRPRLLLTAAVAAGKATIDKAYEVDKIGQILDLINLMAYDLRG 329
>SB_42786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 31.9 bits (69), Expect = 0.51
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -2
Query: 448 QELVFIGEGATPVSGTGILPVQIQTVEVIFLQEVDNASDE 329
+E +FIG+ V G+G +QT ++ + V N SDE
Sbjct: 375 KESLFIGQRPCDVRGSGTRTTDVQTACLVIINSVQNISDE 414
>SB_17224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 935
Score = 31.1 bits (67), Expect = 0.90
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Frame = +3
Query: 24 ARIVCYFSNWAVYRPGVGRYGIEDIPVDLC--THLIYSFIGVTEKSSEVLIIDPELDV-- 191
+R++ +++ Y GV GI + D C TH +Y+++ V + + + D ELD
Sbjct: 502 SRLLSAYTHAYTYAEGVAD-GIRLLETDTCVATHRVYAYVYVMARRNGKRMSDEELDAFL 560
Query: 192 -----DKSGFRNFTSLRSKHP 239
+ GF+ T+L +K P
Sbjct: 561 RPIYYARGGFQGVTALHAKLP 581
>SB_15557| Best HMM Match : Cu_amine_oxid (HMM E-Value=0)
Length = 1009
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 74 WTLWHRRHPRGFVYPLDLFLYWRH 145
W +HR HP FVYPL +Y H
Sbjct: 477 WYAFHRDHPPMFVYPLPFEIYIDH 500
>SB_48652| Best HMM Match : RVT_1 (HMM E-Value=0.0009)
Length = 938
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -1
Query: 317 CSSGPPCVSTWSRLQPNRQPRHELDIGVFGAEGCEVTETTLIYVQLRIDN 168
C +G WS ++ + +G F A C + T ++QL++DN
Sbjct: 541 CCNGQSTGGLWSEVESRNHINYLETLGAFFALKCFARDVTCKHIQLKLDN 590
>SB_46531| Best HMM Match : Cu_amine_oxid (HMM E-Value=0)
Length = 900
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 74 WTLWHRRHPRGFVYPLDLFLYWRH 145
W +HR HP FVYPL +Y H
Sbjct: 314 WYAFHRDHPPLFVYPLPFEIYIDH 337
>SB_31994| Best HMM Match : CPSase_L_chain (HMM E-Value=0)
Length = 945
Score = 29.1 bits (62), Expect = 3.6
Identities = 23/91 (25%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +2
Query: 206 P*LHIP-PLQTPRCQVHVAVGGWAEGGSKYSHMVAQ----KSTRMSFIRSVVDFLKKYDF 370
P LH+ P +T ++ V + + Y M+A+ TR S +R + + LKKY+
Sbjct: 446 PLLHLTTPQETQHIRIDTGVRQGDQVSTYYDPMIAKLVVWSETRPSALRLLKESLKKYNV 505
Query: 371 DGLDLDWEYPGAADRGGSFSDKDKFLYFVQE 463
GL+ + + + SF D F+++
Sbjct: 506 VGLETNISFLTSLCDHNSFQAGDVHTDFIKQ 536
>SB_39226| Best HMM Match : bZIP_1 (HMM E-Value=4.9)
Length = 121
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 262 NRDMNLTSGCLERRDVKLRKPLLSTSNSGSIMRTSLDFSVTPIKE*IKWVHKST 101
NR + +ER + LRK L + G RT L + T ++ K +HK+T
Sbjct: 24 NRSLAKKISYMERENEMLRKMLKHSEQEGEKFRTELIKTTTELRTLRKELHKAT 77
>SB_42709| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 517 PLANFRLMEGYHVPELCQXLDA 582
P FRL+ YH PELC +D+
Sbjct: 165 PFHLFRLLLQYHDPELCSFMDS 186
>SB_25305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 110
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 517 PLANFRLMEGYHVPELCQXLDA 582
P FRL+ YH PELC +D+
Sbjct: 77 PFHLFRLLLQYHDPELCSFMDS 98
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,390,105
Number of Sequences: 59808
Number of extensions: 520947
Number of successful extensions: 1380
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1376
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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