Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0655
         (752 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   3.5  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    22   4.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.0  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   8.0  

>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 443 ERKKELSKMAVSGLSEDLELPAPRXWICNQ 532
           +  K+  K AV  + + L   APR WI N+
Sbjct: 193 DNDKDGYKRAVYKIGQLLTYRAPRPWIYNE 222


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 443 ERKKELSKMAVSGLSEDLELPAPRXWICNQ 532
           +  K+  K AV  + + L   APR WI N+
Sbjct: 193 DNDKDGYKRAVYKIGQLLTYRAPRPWIHNE 222


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 451 EGIIQNGGFGVVR 489
           +G+I  G FG+VR
Sbjct: 454 QGVIGEGAFGIVR 466


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 643 SGKVAASVLFQEAXSE*XVQAFGLN 717
           +GK+ ASV F E+ S   + + G+N
Sbjct: 116 AGKLLASVHFAESQSRRILASAGIN 140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.315    0.132    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,479
Number of Sequences: 336
Number of extensions: 2361
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20131186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)