Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0655
         (752 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    28   0.36 
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          27   0.82 
AJ821850-1|CAH25390.1|  426|Anopheles gambiae alpha-2,6-sialyltr...    26   1.4  
AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    25   3.3  
AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical prote...    24   5.8  

>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 27.9 bits (59), Expect = 0.36
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 257 AMVKESHRVPASVQAVAPDWLSIKELASELTKAPV 361
           AM   S  VPAS+Q +   W++ ++L  +    PV
Sbjct: 604 AMALRSKEVPASLQKLLQHWMTDRQLVFDTDDGPV 638



 Score = 23.8 bits (49), Expect = 5.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 321 Q*RSWLRS*PRHRSRPKWR 377
           Q R + R  P HR +P+WR
Sbjct: 227 QQRRFHRQSPAHRRKPRWR 245


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 20/64 (31%), Positives = 28/64 (43%)
 Frame = -1

Query: 752 PWTTCDXELSPGFKPKAWTSYSXSASWNNTEAATLPEASXTGTXAVXGSNALR*SXSSAT 573
           P  T    LSP     + +S S  AS N+  +   PE+S +   A      L  S S+ T
Sbjct: 57  PGRTYASALSPSSSSASPSSPSSVASPNSRASNMSPESSASDQSAAYTLQNLNLSSSAGT 116

Query: 572 LVYP 561
           + YP
Sbjct: 117 MNYP 120


>AJ821850-1|CAH25390.1|  426|Anopheles gambiae
           alpha-2,6-sialyltransferase protein.
          Length = 426

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 414 TETLTGKLTNTESSTLALTGALVNSEASSFID 319
           T  L G +TN     +A  G+L  S+  SFID
Sbjct: 191 TSPLFGDVTNGSCVIVASAGSLKRSQLGSFID 222


>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +1

Query: 202 STAKVKASNKEVALRQSRSYGQGESQGAGISASRGSG 312
           +T  V ++    + R +RSYG     G    +SRG G
Sbjct: 369 TTDSVDSAKFPPSFRIARSYGSSNRSGLRYRSSRGQG 405


>AJ441131-2|CAD29631.1|  208|Anopheles gambiae hypothetical protein
           protein.
          Length = 208

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 423 SALTETLTGKLTNTESSTLALTGALVNSEASSFI 322
           S++T T T    +    +LA+TG  + S  SSF+
Sbjct: 91  SSITTTTTSTCHSHLLPSLAITGLSIGSSNSSFL 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.132    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,599
Number of Sequences: 2352
Number of extensions: 10618
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77755161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)