Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0655
         (752 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.        31   3.4  
AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens ...    31   3.4  
BC002945-1|AAH02945.2|  477|Homo sapiens C9orf86 protein protein.      31   5.9  
AL355987-8|CAI12686.1|  520|Homo sapiens chromosome 9 open readi...    31   5.9  
AJ133768-1|CAB46729.1|  470|Homo sapiens ZASP protein protein.         31   5.9  

>BC117319-1|AAI17320.1|  257|Homo sapiens TPRXL protein protein.
          Length = 257

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 19/72 (26%), Positives = 39/72 (54%)
 Frame = -3

Query: 513 LGAGSSRSSDNPETAILDNSFFRSLVDT*TSALTETLTGKLTNTESSTLALTGALVNSEA 334
           LG+G SRSS +   +IL +S   S + + +S+ +   +   +++ SS+ + +    +S  
Sbjct: 30  LGSGGSRSSSSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSST 89

Query: 333 SSFIDSQSGATA 298
           SS   S S +++
Sbjct: 90  SSPSSSSSSSSS 101


>AK092426-1|BAC03887.1|  258|Homo sapiens protein ( Homo sapiens
           cDNA FLJ35107 fis, clone PLACE6006871, moderately
           similar to SUPPRESSOR PROTEIN SRP40. ).
          Length = 258

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 19/72 (26%), Positives = 39/72 (54%)
 Frame = -3

Query: 513 LGAGSSRSSDNPETAILDNSFFRSLVDT*TSALTETLTGKLTNTESSTLALTGALVNSEA 334
           LG+G SRSS +   +IL +S   S + + +S+ +   +   +++ SS+ + +    +S  
Sbjct: 30  LGSGGSRSSSSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSST 89

Query: 333 SSFIDSQSGATA 298
           SS   S S +++
Sbjct: 90  SSPSSSSSSSSS 101


>BC002945-1|AAH02945.2|  477|Homo sapiens C9orf86 protein protein.
          Length = 477

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = -2

Query: 640 PLXPAPXPXSEATL*DSPXPALPWFTLKLLPXPVXWLIANPPPWXWQFQ 494
           P    P P SEA     P PA P       P P   +I+ PPPW W+ +
Sbjct: 287 PSSVPPVPPSEAL----PPPACP-----SAPAPRRSIISRPPPWGWRLR 326


>AL355987-8|CAI12686.1|  520|Homo sapiens chromosome 9 open reading
           frame 86 protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 18/49 (36%), Positives = 22/49 (44%)
 Frame = -2

Query: 640 PLXPAPXPXSEATL*DSPXPALPWFTLKLLPXPVXWLIANPPPWXWQFQ 494
           P    P P SEA     P PA P       P P   +I+ PPPW W+ +
Sbjct: 330 PSSVPPVPPSEAL----PPPACP-----SAPAPRRSIISRPPPWGWRLR 369


>AJ133768-1|CAB46729.1|  470|Homo sapiens ZASP protein protein.
          Length = 470

 Score = 30.7 bits (66), Expect = 5.9
 Identities = 15/30 (50%), Positives = 16/30 (53%)
 Frame = -1

Query: 95  PWPAPWXLIPTPAP*ETPKPFFWLTPCPCP 6
           P PAP    P+PAP  TP P    TP P P
Sbjct: 174 PXPAP-AYTPSPAPAYTPSPVPTYTPSPAP 202


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.315    0.132    0.359 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,347,973
Number of Sequences: 237096
Number of extensions: 1871137
Number of successful extensions: 9263
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9114
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)