Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0654
         (923 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    23   4.4  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   7.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   7.8  

>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/47 (23%), Positives = 24/47 (51%)
 Frame = -3

Query: 498 DFVDVLVDSGCRGDRIVKRQNFDPTNTSFLHVHLEFFLHDHPLVNEQ 358
           ++++ LVD G  G R+   ++  P +   ++  L+    DH  ++ Q
Sbjct: 187 EYMNHLVDLGVAGFRVDAAKHMWPADLEAIYASLKNLNTDHGFLDGQ 233


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 477 QPIRQRSHALNIEEIVIPSDLEXVILVVIDA 569
           Q + +  H  +I    +PS+ +  ILV+I A
Sbjct: 357 QKVAEERHKTDINITTVPSEQQWGILVLIIA 387


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 416 VFCTSTWNFSCTIILSSTNKAELFSSVPTAVSF 318
           V  + T+ F  T ILS  NKA     V T  +F
Sbjct: 368 VSLSGTFGFFGTHILSYINKASFKKIVNTVATF 400


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,745
Number of Sequences: 336
Number of extensions: 4131
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)