Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0653
(903 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 146 2e-35
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 3e-18
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 2e-17
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 4e-17
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 74 1e-13
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 1e-12
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 1e-12
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 67 2e-11
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 67 2e-11
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 2e-11
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 67 2e-11
SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6) 62 8e-10
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 61 1e-09
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 59 6e-09
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 57 2e-08
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 55 7e-08
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 51 1e-06
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 50 2e-06
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 48 1e-05
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 44 2e-04
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 43 4e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 40 0.002
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 38 0.008
SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 36 0.059
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.059
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.10
SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8) 33 0.32
SB_12713| Best HMM Match : TP2 (HMM E-Value=2.9) 32 0.73
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 0.96
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 31 1.7
SB_18155| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17) 30 2.2
SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031) 30 2.9
SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031) 30 2.9
SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06) 29 3.9
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_33247| Best HMM Match : Ammonium_transp (HMM E-Value=0) 29 6.8
SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_53106| Best HMM Match : PLAT (HMM E-Value=0) 28 9.0
SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14) 28 9.0
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 146 bits (354), Expect = 2e-35
Identities = 65/89 (73%), Positives = 75/89 (84%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQN 433
+D LE TNLRRCTYLVLDEADRMLDMGFEPQIR II+QIRPDRQ LMWSATWP+EVQ
Sbjct: 194 IDMLESRKTNLRRCTYLVLDEADRMLDMGFEPQIRTIIDQIRPDRQTLMWSATWPKEVQG 253
Query: 434 LAEEFLHDYIQINIGSLELSANHNISRLL 520
LA +FL DY+ I +GSL L+ANH I +++
Sbjct: 254 LAHDFLSDYVHITVGSLGLTANHKILQIV 282
Score = 116 bits (278), Expect = 3e-26
Identities = 56/81 (69%), Positives = 65/81 (80%)
Frame = +3
Query: 15 LLPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 194
+LP IVHI +QP L DGPIVLVL PTRELAQQ+Q+VA G+ +R+TCI+GGAPKG
Sbjct: 114 ILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSVGKHCKLRSTCIYGGAPKG 173
Query: 195 PQGRCLERGVEIVIATPGRLL 257
PQ R LERGVEI IATPGRL+
Sbjct: 174 PQIRELERGVEICIATPGRLI 194
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 508 LQIVDVCEEWEKNDKLITLLTEISSEEXTQTIILLKPKGXSTTYVRRXTVPAC 666
LQIVDVCE+ EK + + + I QT+I + K + R+ C
Sbjct: 279 LQIVDVCEDHEKEHNVGSFIGGIVILSSLQTLIFTETKRRADELTRKLRSDGC 331
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 93.5 bits (222), Expect = 2e-19
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +3
Query: 15 LLPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 194
L PA+VHI++QP L DGPIVL+ APTREL QQI A FG++ ++ +FGG K
Sbjct: 572 LWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNIHVVAVFGGGNKY 631
Query: 195 PQGRCLERGVEIVIATPGRLL 257
Q + L+ G EIV+ATPGRL+
Sbjct: 632 EQSKALQEGAEIVVATPGRLI 652
Score = 52.0 bits (119), Expect = 6e-07
Identities = 30/77 (38%), Positives = 45/77 (58%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQN 433
+D ++ + TNL R TYLV DEADRM DMGF L++SAT+ ++V++
Sbjct: 652 IDHVKAKATNLHRVTYLVFDEADRMFDMGF----------------ALLFSATFKKKVEH 695
Query: 434 LAEEFLHDYIQINIGSL 484
L + L D +++ IG L
Sbjct: 696 LCRDILVDPVRVVIGEL 712
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 89.8 bits (213), Expect = 3e-18
Identities = 41/78 (52%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Frame = +2
Query: 257 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPDRQVLMWSATWPRE 424
DF+EK +L+ +L+LDEADRMLDMGFEP IR+I+E + + +RQ LM+SAT+P E
Sbjct: 851 DFIEKGKVSLKGLQFLILDEADRMLDMGFEPAIRRIVESMGMPDKSERQTLMFSATFPEE 910
Query: 425 VQNLAEEFLHDYIQINIG 478
+Q LA +FL+DY+ + +G
Sbjct: 911 IQRLAGDFLNDYLFLTVG 928
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +3
Query: 72 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 251
P + +APTRELA QI A +F +R +GG Q R L+ G +++ TPGR
Sbjct: 789 PQAMCIAPTRELANQIYLEARKFAHGTMLRPVVCYGGVSVSHQLRQLQSGCNLLVGTPGR 848
Query: 252 LLIF 263
L F
Sbjct: 849 LTDF 852
Score = 29.1 bits (62), Expect = 5.1
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = +3
Query: 612 ETKRXVDDICXXXXXXXXXXXXIHGDXNQQDRDYVLNQFRNXPPP 746
E+KR D + IHGD QQ+R+ L+ FR P
Sbjct: 970 ESKRSADFLAIFLSGEGFPTTSIHGDRLQQEREEALDDFRKGRCP 1014
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 86.6 bits (205), Expect = 2e-17
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 8/75 (10%)
Frame = +2
Query: 278 TNLRRCTYLVLDEADRMLDMGFEPQIRK--------IIEQIRPDRQVLMWSATWPREVQN 433
TN +RCTYLVLDEADRM DMGFEPQI K II+ IRPDRQ +M+SAT+PR+++
Sbjct: 217 TNCQRCTYLVLDEADRMFDMGFEPQITKIRYPKVMRIIDCIRPDRQTVMFSATFPRQMEA 276
Query: 434 LAEEFLHDYIQINIG 478
LA + L I+I +G
Sbjct: 277 LARKILDKPIEIQVG 291
Score = 55.6 bits (128), Expect = 5e-08
Identities = 26/70 (37%), Positives = 42/70 (60%)
Frame = +3
Query: 48 PRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVE 227
P ++ I +V+ PTRELA QI + +F + ++R C++GG Q L+RG E
Sbjct: 137 PVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAE 196
Query: 228 IVIATPGRLL 257
I++ TPGR++
Sbjct: 197 IIVCTPGRMI 206
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 85.8 bits (203), Expect = 4e-17
Identities = 45/96 (46%), Positives = 68/96 (70%), Gaps = 4/96 (4%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ-IRPD---RQVLMWSATWPR 421
+D +++ L +LVLDEADRMLDMGFEPQIR+I++Q P RQ LM+SAT+P+
Sbjct: 987 VDMMDRGRVGLDSIRFLVLDEADRMLDMGFEPQIRRIVDQDSMPKTGIRQTLMFSATFPK 1046
Query: 422 EVQNLAEEFLHDYIQINIGSLELSANHNISRLLMFV 529
E+Q LA +FL +YI + +G + S + NI++ +++V
Sbjct: 1047 EIQMLARDFLENYIFLAVGKVG-STSENITQKVVWV 1081
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 159 RNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 257
R ++GGA G Q R L+R +++ATPGRL+
Sbjct: 955 RPCVVYGGADIGSQLRELDRNCHLLVATPGRLV 987
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 74.1 bits (174), Expect = 1e-13
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 5/107 (4%)
Frame = +2
Query: 257 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQ----IRPDRQVLMWSATWPRE 424
DF+ +E L +L+LDEADRMLD+GF P I K+IE+ + RQ LM+SAT+P E
Sbjct: 615 DFVSREKIYLGSIQHLILDEADRMLDLGFGPDIHKLIEESNMTAKESRQTLMFSATFPDE 674
Query: 425 VQNLAEEFLH-DYIQINIGSLELSANHNISRLLMFVRNGRRMIN*LH 562
+Q+LA FL DY+ + +G + N +I++ ++ V NG + LH
Sbjct: 675 IQHLAGSFLKPDYLFLAVGRVG-GTNLDITQHVITV-NGSEKRDKLH 719
Score = 56.4 bits (130), Expect = 3e-08
Identities = 31/88 (35%), Positives = 44/88 (50%)
Frame = +3
Query: 15 LLPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKG 194
+LP + +I Q P+ L +APTRELA+QI A +F ++ +GG
Sbjct: 534 MLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFSDHTPIKVCVCYGGVSVP 593
Query: 195 PQGRCLERGVEIVIATPGRLLIFWRRRQ 278
Q LERG ++ TPGRL F R +
Sbjct: 594 YQASQLERGCHFLVGTPGRLQDFVSREK 621
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 71.3 bits (167), Expect = 1e-12
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +2
Query: 281 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDY 460
N+ YLVLDEADRM+DMGFE +R I + RQ L++SAT P+++QN A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 461 IQINIGSLELSANHNISRLLMF 526
+ +N+G +A+ ++ ++L+F
Sbjct: 73 VTVNVGRAG-AASLDVIQVLIF 93
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 609 AETKRXVDDICXXXXXXXXXXXXIHGDXNQQDRDYVLNQF 728
AE K VDDI IHGD +Q++R + + +F
Sbjct: 94 AEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREF 133
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 71.3 bits (167), Expect = 1e-12
Identities = 34/82 (41%), Positives = 54/82 (65%)
Frame = +2
Query: 281 NLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDY 460
N+ YLVLDEADRM+DMGFE +R I + RQ L++SAT P+++QN A+ L
Sbjct: 13 NVSPYRYLVLDEADRMIDMGFEEDVRTIFSYFKSQRQTLLFSATMPKKIQNFAKSALVKP 72
Query: 461 IQINIGSLELSANHNISRLLMF 526
+ +N+G +A+ ++ ++L+F
Sbjct: 73 VTVNVGRAG-AASLDVIQVLIF 93
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 609 AETKRXVDDICXXXXXXXXXXXXIHGDXNQQDRDYVLNQF 728
AE K VDDI IHGD +Q++R + + +F
Sbjct: 94 AEKKSDVDDIHEYLLLKGVEAVAIHGDKSQEERVHAIREF 133
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 67.3 bits (157), Expect = 2e-11
Identities = 32/98 (32%), Positives = 63/98 (64%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQN 433
LD ++K+ ++ +C LV+DEAD++L M F+ + +II+ + +RQ+L++SAT+P V++
Sbjct: 184 LDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRD 243
Query: 434 LAEEFLHDYIQINIGSLELSANHNISRLLMFVRNGRRM 547
E+ L +IN+ EL+ H +++ FV +++
Sbjct: 244 FKEKHLRKPYEINLMD-ELTL-HGVTQYYAFVEEKQKV 279
Score = 35.5 bits (78), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +3
Query: 81 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP-KGPQGRCLERG------VEIVIA 239
LVL PTRELA Q Q+ E G+ + + GG K R + V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 240 TPGRLLIFWRRR 275
TPGR+L +++
Sbjct: 179 TPGRVLDLMKKK 190
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 67.3 bits (157), Expect = 2e-11
Identities = 32/98 (32%), Positives = 63/98 (64%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQN 433
LD ++K+ ++ +C LV+DEAD++L M F+ + +II+ + +RQ+L++SAT+P V++
Sbjct: 184 LDLMKKKLADMSKCQMLVMDEADKLLSMDFKKMLEQIIKHLPENRQILLFSATFPISVRD 243
Query: 434 LAEEFLHDYIQINIGSLELSANHNISRLLMFVRNGRRM 547
E+ L +IN+ EL+ H +++ FV +++
Sbjct: 244 FKEKHLRKPYEINLMD-ELTL-HGVTQYYAFVEEKQKV 279
Score = 35.5 bits (78), Expect = 0.059
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Frame = +3
Query: 81 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP-KGPQGRCLERG------VEIVIA 239
LVL PTRELA Q Q+ E G+ + + GG K R + V +++A
Sbjct: 119 LVLVPTRELALQTSQICIELGKHMGAQVMVTTGGTSLKDDILRLYNKDIFVHVVVHVIVA 178
Query: 240 TPGRLLIFWRRR 275
TPGR+L +++
Sbjct: 179 TPGRVLDLMKKK 190
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/53 (50%), Positives = 42/53 (79%)
Frame = +2
Query: 335 MGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGSLELS 493
MGFEP+I+KI+ IRPDRQ +M SATWP VQ +A++++ D +++ +G L+L+
Sbjct: 1 MGFEPEIKKILLDIRPDRQTVMTSATWPPGVQRMADQYMTDPVRVFVGCLDLN 53
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 66.9 bits (156), Expect = 2e-11
Identities = 44/124 (35%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Frame = +2
Query: 302 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGS 481
LVLDEADR+LDMGF P + IIE + +RQ L++SAT R V++LA L Y+ +
Sbjct: 200 LVLDEADRILDMGFAPTLNAIIENLPSERQTLLYSATQTRSVKDLARLSLQSYVVCELPD 259
Query: 482 -----LELSANHNISRLLMFVRNGRRMIN*LHCSLRYLQRRXPKLLYC*NQKXGRRHMXG 646
NH S++L+FV + + + ++ R LQ P + QK +R
Sbjct: 260 KLNFLFSFIRNHLKSKILVFV-SSCKQVKFIYEGFRRLQPGIPLMALYGKQKQLKRVAIY 318
Query: 647 DXPC 658
D C
Sbjct: 319 DEFC 322
Score = 41.5 bits (93), Expect = 0.001
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +3
Query: 15 LLPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAP-K 191
L+P I+ + + + DG LV++PTRELA Q +V + G + I GG K
Sbjct: 105 LIP-IIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKHDLSAGLIIGGKDLK 163
Query: 192 GPQGRCLERGVEIVIATPGRLL 257
Q R ++ IV+ TPGRLL
Sbjct: 164 NEQKRIMK--TNIVVCTPGRLL 183
>SB_37968| Best HMM Match : DEAD (HMM E-Value=3.6)
Length = 127
Score = 61.7 bits (143), Expect = 8e-10
Identities = 28/58 (48%), Positives = 44/58 (75%)
Frame = +2
Query: 302 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINI 475
LVLDEADRMLDMGF IR+++ ++ RQ L++SAT+ +++ LAE+ LH+ ++I +
Sbjct: 7 LVLDEADRMLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEV 64
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 61.3 bits (142), Expect = 1e-09
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 60 RDDGPIVLVLAPTRELAQQIQQVANEFGQ-SIHVRNTCIFGGAPKGPQGRCLERGVEIVI 236
R P VLV+APTRELA+Q V NEF ++ CI+GG P PQ + G+++++
Sbjct: 144 RGRAPKVLVMAPTRELAKQ---VGNEFENLKSNLEVYCIYGGMPYEPQENAINSGLDVLV 200
Query: 237 ATPGRLLIFWRR 272
TPGR+L F R+
Sbjct: 201 GTPGRILDFMRQ 212
Score = 51.6 bits (118), Expect = 8e-07
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 5/71 (7%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKII----EQIRPDR-QVLMWSATWP 418
LDF+ + T +L + ++VLDE DRMLDMGF + +++ + R D+ Q L++SAT P
Sbjct: 207 LDFMRQGTLDLSKLKHVVLDEVDRMLDMGFAESVEEVLAASYAEDREDKPQTLLFSATLP 266
Query: 419 REVQNLAEEFL 451
N A++++
Sbjct: 267 PWAVNTAKKYM 277
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 58.8 bits (136), Expect = 6e-09
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Frame = +2
Query: 281 NLRRCTYLVLDEADRMLDMGFEPQIRKII---EQIRPDRQVLMWSATWPREVQNLAEEFL 451
+L + TYLV+DE DRML MG E Q+RKI+ RQ L+WSAT P ++ LA +
Sbjct: 230 DLYKITYLVMDEPDRMLGMGMEEQLRKIVGLATGTSRARQTLLWSATLPESLERLARSAV 289
Query: 452 HDYIQINIG 478
+ I I +G
Sbjct: 290 LNPITIQVG 298
Score = 39.1 bits (87), Expect = 0.005
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 22/90 (24%)
Frame = +3
Query: 66 DGPIVLVLAPTRELAQQIQQVANEF-------------GQSI---------HVRNTCIFG 179
D P+ L+L PTREL QQ+ +E QS+ + + G
Sbjct: 144 DTPVALILTPTRELMQQVFMNVSEMLDVIRCPGNPGPSNQSVIYDTQQFTARYKAVAVCG 203
Query: 180 GAPKGPQGRCLERGVEIVIATPGRLLIFWR 269
G P Q L G ++V+ATPGRLL ++
Sbjct: 204 GVPVSTQTIALREGADVVVATPGRLLDLYK 233
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 57.2 bits (132), Expect = 2e-08
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +2
Query: 257 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNL 436
D + + R LVLDEAD ML+ GF+ QI + + P QV++ SAT P E+ +
Sbjct: 128 DMIRRRNLRTRSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLLSATLPHEILEM 187
Query: 437 AEEFLHDYIQINIGSLELS 493
+F+ D I+I + EL+
Sbjct: 188 TSKFMTDPIRILVKRDELT 206
Score = 53.2 bits (122), Expect = 3e-07
Identities = 31/68 (45%), Positives = 37/68 (54%)
Frame = +3
Query: 72 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 251
P LVL+PTRELA QIQ+V G + V+ GG G R L+ G IV TPGR
Sbjct: 66 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 125
Query: 252 LLIFWRRR 275
+ RRR
Sbjct: 126 VFDMIRRR 133
Score = 28.7 bits (61), Expect = 6.8
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)
Frame = +3
Query: 615 TKRXVDDICXXXXXXXXXXXXIHGDXNQQDRDYVLNQFR-NXPPPYWSPRLXAXGTRCWK 791
TKR VD + +HGD Q++R+ ++ FR S + A G +
Sbjct: 245 TKRKVDWLTEKMREANFTVASMHGDMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQ 304
Query: 792 I*NLWINXXFPNN 830
+ +L IN PNN
Sbjct: 305 V-SLVINYDLPNN 316
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/92 (29%), Positives = 55/92 (59%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQN 433
++ + ++ +L V+DE D ML +GFE Q+++I+E++ RQ +++SAT P ++
Sbjct: 267 VEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQQILERLSNRRQTMLFSATIPPSIEA 326
Query: 434 LAEEFLHDYIQINIGSLELSANHNISRLLMFV 529
+A L+ + I+ GS L + +L+++V
Sbjct: 327 MASRLLNAPVFISAGSPSLPTK-AVKQLILWV 357
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/58 (50%), Positives = 35/58 (60%)
Frame = +3
Query: 81 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 254
LVLAPTRELAQQIQ+V G +HV+ GG LE GV +V+ TPGR+
Sbjct: 163 LVLAPTRELAQQIQKVVLALGDYMHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRV 220
Score = 53.2 bits (122), Expect = 3e-07
Identities = 26/79 (32%), Positives = 43/79 (54%)
Frame = +2
Query: 257 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNL 436
D + + N R VLDEAD ML GF+ QI + ++ QV++ SAT P +V +
Sbjct: 222 DMINRGVLNTRDIKLFVLDEADEMLSRGFKDQIYDVFTRLPTSVQVVLLSATMPTDVLEV 281
Query: 437 AEEFLHDYIQINIGSLELS 493
+F+ D ++I + E++
Sbjct: 282 TNKFMRDVVRILVKREEVT 300
Score = 32.7 bits (71), Expect = 0.42
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +3
Query: 609 AETKRXVDDICXXXXXXXXXXXXIHGDXNQQDRDYVLNQFRNXPPPYW-SPRLXAXGTRC 785
A T+R VD + +HGD +Q++RD ++ +FR+ + L A G
Sbjct: 337 ANTRRKVDWLAAKMTEKDHTVSSMHGDMSQKERDIIMKEFRSGSSRVLITTDLLARGIDV 396
Query: 786 WKI*NLWINXXFPNN 830
++ +L IN P+N
Sbjct: 397 HQV-SLVINYDLPSN 410
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 55.2 bits (127), Expect = 7e-08
Identities = 26/62 (41%), Positives = 41/62 (66%), Gaps = 4/62 (6%)
Frame = +3
Query: 18 LPAIVHIINQPRLLRDD----GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGA 185
+P +V I+ P++ RD+ GP L+LAPTRELAQQI++ +FG+ + +R + GGA
Sbjct: 157 IPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKFGRPLGIRTVSVIGGA 216
Query: 186 PK 191
+
Sbjct: 217 DR 218
Score = 40.7 bits (91), Expect = 0.002
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 24/76 (31%)
Frame = +2
Query: 296 TYLVLDEADRMLDMGFEPQIRKIIE-----QIRPD-------------------RQVLMW 403
T V+ ADRM+DMGFEP+++KI+E ++PD RQ +M+
Sbjct: 209 TVSVIGGADRMIDMGFEPEVQKILEHLPVSNVKPDSEDSEDPEHLLTHMGKDKYRQTVMF 268
Query: 404 SATWPREVQNLAEEFL 451
+AT P +V+ LA+ +L
Sbjct: 269 TATMPPQVERLAKNYL 284
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 50.8 bits (116), Expect = 1e-06
Identities = 28/63 (44%), Positives = 35/63 (55%)
Frame = +3
Query: 72 PIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGR 251
P LVL+PTRELA QIQ+V G + V+ GG G R L+ G IV TPGR
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGDYMSVQCHACIGGTNIGEDIRKLDYGQHIVSGTPGR 63
Query: 252 LLI 260
+ +
Sbjct: 64 VFV 66
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 50.4 bits (115), Expect = 2e-06
Identities = 30/80 (37%), Positives = 41/80 (51%)
Frame = +3
Query: 18 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 197
LP + +++ P+ L L+L PTRELA QI + G I V+ I GG
Sbjct: 20 LPILQALLDNPQRL-----FALILTPTRELAFQISEQCEALGSGIGVKCAVIVGGIDMMS 74
Query: 198 QGRCLERGVEIVIATPGRLL 257
Q L + I+IATPGRL+
Sbjct: 75 QALMLAKKPHIIIATPGRLI 94
Score = 33.9 bits (74), Expect = 0.18
Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +2
Query: 254 LDFLEK-ETTNLRRCTYLVLDEADRMLDMGFEPQ 352
+D LE + +LR YLV+DEADR+L+M FE +
Sbjct: 94 IDHLENTKGFSLRTLKYLVMDEADRILNMDFEKE 127
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 50.0 bits (114), Expect = 3e-06
Identities = 22/47 (46%), Positives = 37/47 (78%)
Frame = +2
Query: 302 LVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAE 442
LV+DEADR+L++GFE ++R+II + RQ +++SAT + V++LA+
Sbjct: 723 LVIDEADRILEIGFEEEMRQIIRILPSKRQTVLFSATQTKNVEDLAK 769
Score = 49.6 bits (113), Expect = 3e-06
Identities = 26/80 (32%), Positives = 46/80 (57%)
Frame = +3
Query: 18 LPAIVHIINQPRLLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGP 197
L +V ++ + + +G V++++PTREL+ Q VA + + + I GG +
Sbjct: 627 LVPVVELLYKLQFKTRNGTGVIIISPTRELSLQTYGVARDLLKHHNFTYGIIMGGVNRKA 686
Query: 198 QGRCLERGVEIVIATPGRLL 257
+ L++GV ++IATPGRLL
Sbjct: 687 EAERLQKGVNLLIATPGRLL 706
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 48.0 bits (109), Expect = 1e-05
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +3
Query: 75 IVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 254
+ L++APTRELA Q++ + + V+ I GG Q R L++ EIV+ATPGRL
Sbjct: 220 LALIMAPTRELALQVKDHLVKAAKYTSVKVAAIVGGMAAPKQQRLLKQRPEIVVATPGRL 279
Score = 38.3 bits (85), Expect = 0.008
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +2
Query: 266 EKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 376
EK +N++ YLV+DEADRM++ G ++ I+E I
Sbjct: 331 EKHVSNIQLLRYLVIDEADRMVEQGHYEELSSILELI 367
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 47.6 bits (108), Expect = 1e-05
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +2
Query: 272 ETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSAT 412
+T NL++ +LVLDEADR+LD F ++ I + + RQ L++SAT
Sbjct: 144 DTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDAVPEKRQTLLFSAT 190
Score = 45.2 bits (102), Expect = 7e-05
Identities = 26/62 (41%), Positives = 31/62 (50%)
Frame = +3
Query: 69 GPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPG 248
G +VL PTRELA QI G+ I ++ I GG Q L +VIATPG
Sbjct: 75 GIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPG 134
Query: 249 RL 254
RL
Sbjct: 135 RL 136
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 43.6 bits (98), Expect = 2e-04
Identities = 19/72 (26%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Frame = +2
Query: 263 LEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAE 442
+E++ +LDEAD++LD F+ QI I + ++Q++ +SAT+P + N +
Sbjct: 146 IEQKYLKTESVRMFILDEADKLLDESFQQQINWIFSALPENKQMMAFSATYPEVLANHLK 205
Query: 443 EFLHD--YIQIN 472
+++ + ++++N
Sbjct: 206 KYMTEPTFVRLN 217
Score = 30.7 bits (66), Expect = 1.7
Identities = 16/59 (27%), Positives = 28/59 (47%)
Frame = +3
Query: 78 VLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 254
+++L PTRE+A Q++ V G +F G + + + I + TPGR+
Sbjct: 84 IIILTPTREIAVQVKDVICAIGCHYDGLACKVFIGGISLEEDKKALKSCHIAVGTPGRV 142
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 42.7 bits (96), Expect = 4e-04
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Frame = +2
Query: 254 LDFLEKETT-NLRRCTYLVLDEADRMLDM-GFEPQIRKIIEQIRPDRQVLMWSATWPREV 427
LD++ K R+ + VLDEAD M+ + G + Q +I + + D QVL++SAT+ +V
Sbjct: 233 LDWIRKSKCFEPRKVSVFVLDEADIMIALQGHQDQSIRIHKSLHKDCQVLLFSATYDEDV 292
Query: 428 QNLAEEFLHDYIQINIGSLELSANHNISRLLMFVRN 535
AE + + I I + E S + NI + + +N
Sbjct: 293 MKFAETVVPNPIIIRLRREEESLD-NIKQYYVVCKN 327
Score = 35.9 bits (79), Expect = 0.045
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Frame = +3
Query: 72 PIVLVLAPTRELAQQIQQVANEFGQSI-HVR-NTCIFGGA-PKGPQGRCLERGVEIVIAT 242
P V+ L+PT ELA+Q +VA G+ H++ N + G P+G +C + I+I T
Sbjct: 174 PQVICLSPTYELARQTGKVAEAMGKHCPHIKINYAVRGNQFPRGQ--KCTD---HIIIGT 228
Query: 243 PGRLLIFWRRRQR 281
PG LL W R+ +
Sbjct: 229 PGTLL-DWIRKSK 240
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 40.3 bits (90), Expect = 0.002
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = +3
Query: 54 LLRDDGPIVLVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIV 233
L R P ++ P RELA QI + A R+ + GG + LE V+++
Sbjct: 450 LARLKRPRACIVVPARELATQILKTAKSLCHHARFRSVGLIGGRKQKWMRDDLESPVDLL 509
Query: 234 IATPGRLLIFWRRRQR 281
+ATPG LL + R++ R
Sbjct: 510 VATPGTLLKY-RQKDR 524
Score = 29.5 bits (63), Expect = 3.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 376
L + +K+ T+LV+DEAD M D F+ +I+ I
Sbjct: 517 LKYRQKDRLFFSDLTHLVIDEADTMFDASFKSLTMEILHTI 557
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 38.3 bits (85), Expect = 0.008
Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Frame = +2
Query: 284 LRRCTYLVLDEADRMLDM---GFEPQIRKIIEQI-RPDRQVLMWSATWPREVQNLAEEFL 451
L +L+LDEAD++ + GF QI I + +PD ++SAT ++ A L
Sbjct: 280 LHNVEWLILDEADKLFEEGKDGFREQIATIYQACNKPDIHRGLFSATLSNGIEEWAGLHL 339
Query: 452 HDYIQINIGSLELSANHNISRLLMFV 529
+++++ +G + SA + + L+FV
Sbjct: 340 DNHVRVTVG-IRNSATATVDQELLFV 364
Score = 28.3 bits (60), Expect = 9.0
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 81 LVLAPTRELAQQIQQVANEFGQSIHVR-NTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 257
+V++PTRELAQQI + + R + A G + +I++ TP RL+
Sbjct: 209 VVVSPTRELAQQIYREFCHLAKGCAFRIHVLTKANASTNTFGAKSSKRFDILVTTPNRLV 268
>SB_53656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 51
Score = 36.3 bits (80), Expect = 0.034
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 266 EKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 376
E+ +N++ YLV+DEADRM++ G ++ I+E I
Sbjct: 2 EEHVSNVQLLRYLVIDEADRMVEQGHYEELSSILELI 38
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 35.5 bits (78), Expect = 0.059
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 66 DGPI-VLVLAPTRELAQQIQQVANEFGQSI-HVRNTCIFGGAP-KGPQGRCLERGVEIVI 236
DG + VLV+ TRELA QI + F + + +++ FGG K Q IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 237 ATPGRLLIFWRRR 275
TPGR+L R +
Sbjct: 173 GTPGRILALTREK 185
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 35.5 bits (78), Expect = 0.059
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Frame = +3
Query: 66 DGPI-VLVLAPTRELAQQIQQVANEFGQSI-HVRNTCIFGGAP-KGPQGRCLERGVEIVI 236
DG + VLV+ TRELA QI + F + + +++ FGG K Q IV+
Sbjct: 113 DGQVSVLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGGINIKKDQQTLKTNCPHIVV 172
Query: 237 ATPGRLLIFWRRR 275
TPGR+L R +
Sbjct: 173 GTPGRILALTREK 185
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 34.7 bits (76), Expect = 0.10
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +3
Query: 81 LVLAPTRELAQQIQQVANEFGQSIHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRLL 257
L+L+PTRELA Q Q+ E G+ ++++ I GG + V+ATPGR L
Sbjct: 355 LILSPTRELALQTQKFIKELGRFTGLKSSVILGG--------------DSVVATPGRFL 399
>SB_43466| Best HMM Match : DEAD (HMM E-Value=1.8)
Length = 210
Score = 33.1 bits (72), Expect = 0.32
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 254 LDFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQ 391
+D ++K T R LVLDEAD ML+ GF+ QI + + P Q
Sbjct: 25 VDGIDKLDT--RSIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQ 68
>SB_12713| Best HMM Match : TP2 (HMM E-Value=2.9)
Length = 349
Score = 31.9 bits (69), Expect = 0.73
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -2
Query: 344 RSPCP--TFYQPHPAPNKCIGAGSLSPSPKN--QESTRSSNNNFHSPLKTSALWSLWSTT 177
R+P P T++ H A KC G S P N ++ T+S +NN + K + T
Sbjct: 56 RAPAPRDTWWAEHQA--KCGGTFSKVKEPDNYKKKKTKSKDNNSETKAKAGTSGLAKNKT 113
Query: 176 KDTSVPHVDAL 144
KD P++ +L
Sbjct: 114 KDNGTPNLPSL 124
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 31.5 bits (68), Expect = 0.96
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = +3
Query: 3 RPGILLPAIVHIINQPRLLRD----DGPIVLVLAPTRELAQQIQQVANEFGQSIH-VRNT 167
R LLP I+H I + + ++ +GP+VL+L + ++ V + ++ R
Sbjct: 238 RLAYLLP-IIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRTRVQ 296
Query: 168 CIFGGAPKGPQGRCLERGVEIVIATPGRLLIFWRR 272
IFGG + + L G E+++ATP L +R
Sbjct: 297 MIFGGGAEEDRIVPLINGCEVLVATPPCFLRMLKR 331
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 30.7 bits (66), Expect = 1.7
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = +2
Query: 335 MGFEPQIRKIIEQIRPDRQVLMWSATWPREVQNLAEEFLHDYIQINIGSLELSANHNISR 514
MGFE I I+ + R+ ++SAT EV+ L L + +++ + +L+ N+ R
Sbjct: 1 MGFEASINTILGYLPKQRRTGLFSATQTDEVEALVRAGLRNPVRVTVRE-KLTKTKNVQR 59
Query: 515 LLMFVRN 535
++N
Sbjct: 60 TPSTLQN 66
>SB_18155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +2
Query: 500 HNISRLLMFVRNGRRMIN*LHCSLRYLQRRXPKLLYC*NQKXGRRHMXGDXP 655
HN+S L F++ GRR CSLR L K +C +K R D P
Sbjct: 3 HNVSYALRFIKPGRRST--AGCSLRNLADSTLKKSFCQLEKSHFRSFLDDDP 52
>SB_10917| Best HMM Match : SPRY (HMM E-Value=1.4e-17)
Length = 635
Score = 30.3 bits (65), Expect = 2.2
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +2
Query: 257 DFLEKETTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQI 376
DF+ + +L + + +LDEAD +L G I KI +I
Sbjct: 148 DFITTDKISLHQVKFFILDEADGLLAQGNNDLIMKIYNKI 187
>SB_51385| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 127
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 LLPAIVHIINQPRLLRDDGPIVLVLAPTRELAQ-QIQQVANEFGQSIHVRNTCIFGGAPK 191
LLPA++H R + + P+V++++P L + QI ++ +E + T G +
Sbjct: 35 LLPALLHKQRLLRNVSGNPPVVIIISPLSSLIRDQISRLPSERATQLRRSETSEVGDEFR 94
Query: 192 GPQGRCLER-GVEIVIATPG 248
+ LE G E + PG
Sbjct: 95 DCEKSKLENGGYEFLFCPPG 114
>SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 233
Score = 29.9 bits (64), Expect = 2.9
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Frame = +3
Query: 15 LLPAIVHIINQPRLLRDDGPIVLVLAPTRELAQ-QIQQVANEFGQSIHVRNTCIFGGAPK 191
LLPA++H R + + P+V++++P L + QI ++ +E + T G +
Sbjct: 141 LLPALLHKQRLLRNVSGNPPVVIIISPLSSLIRDQISRLPSERATQLRRSETSEVGDEFR 200
Query: 192 GPQGRCLER-GVEIVIATPG 248
+ LE G E + PG
Sbjct: 201 DCEKSKLENGGYEFLFCPPG 220
>SB_50927| Best HMM Match : DEAD (HMM E-Value=3.2e-06)
Length = 368
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +2
Query: 233 YCYSW*TLDFLEKETTNLRRCTYLVLDEA-DRMLDMGFEPQIRKIIEQIRPDRQVLMWSA 409
YC + L + E ++T L +++V+DE +R + F + + + RPD +V++ SA
Sbjct: 74 YCTTGILLRYFESDST-LAGVSHVVVDEVHERTEESDFLMMVLRDLIMERPDLRVILMSA 132
Query: 410 TWPREVQNLAEEFLHDYIQINI 475
T L E+ +D I+I
Sbjct: 133 TLD---SKLFSEYFYDAPVIHI 151
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 68 WSNSPCVGSNKRVSPTNTAGCQ*IWS 145
+ +PC G N +VSP N C WS
Sbjct: 767 YGGAPCPGRNIQVSPCNPTDCPSYWS 792
>SB_33247| Best HMM Match : Ammonium_transp (HMM E-Value=0)
Length = 486
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = -2
Query: 506 CCGWPRAQENQC*SGCSHAGTLQLDSVLLGAM 411
CCG R ENQ S CS G +Q S + GA+
Sbjct: 316 CCGLVRRGENQLTSNCSQ-GRIQAFSSVYGAL 346
>SB_3229| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 45
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 150 IHVRNTCIFGGAPKGPQGRCLERGVEIVIATPGRL 254
+HV+ GG LE GV +V+ TPGR+
Sbjct: 1 MHVKCHACIGGTNVREDRMKLEEGVHVVVGTPGRV 35
>SB_53106| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1790
Score = 28.3 bits (60), Expect = 9.0
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -2
Query: 863 RSCRXDXRNPRIIGKXXVYPQISNLPTSSP 774
R+ D N RIIG+ P ++ LPT P
Sbjct: 1525 RNLSVDRENKRIIGEKGTGPLVNRLPTGEP 1554
>SB_50451| Best HMM Match : Avirulence (HMM E-Value=0.14)
Length = 1085
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Frame = -2
Query: 278 LSPSPKNQESTRS---SNNNFHSPLKTSALWSLWSTTKDTSVP 159
L PSP +T + +NNN++ PL+ L TT T+VP
Sbjct: 872 LLPSPGTTTTTTTVPWNNNNYYRPLEQQQLLPSPGTTTTTTVP 914
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,531,344
Number of Sequences: 59808
Number of extensions: 596232
Number of successful extensions: 1746
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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