Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0652
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-5|CAA94898.1|  355|Caenorhabditis elegans Hypothetical pr...    33   0.19 
U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical pr...    32   0.45 
Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical pr...    29   3.1  
Z79605-4|CAB01902.2|  557|Caenorhabditis elegans Hypothetical pr...    28   9.6  
Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical pr...    28   9.6  
U61236-1|AAB17541.1|  557|Caenorhabditis elegans M75 protein.          28   9.6  
U23450-6|AAK31469.1|  790|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z71181-5|CAA94898.1|  355|Caenorhabditis elegans Hypothetical
           protein K07C5.5 protein.
          Length = 355

 Score = 33.5 bits (73), Expect = 0.19
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 278 FLNFWYSWRYQILEFKKDYWWHSPLNMRGY 367
           F  FWYSWR+Q+  FK  +   + ++MRGY
Sbjct: 85  FPEFWYSWRFQLEHFKHTHRCIA-IDMRGY 113


>U00052-2|AAK95881.1|  404|Caenorhabditis elegans Hypothetical
           protein K02F3.6 protein.
          Length = 404

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 13/27 (48%), Positives = 18/27 (66%)
 Frame = +2

Query: 287 FWYSWRYQILEFKKDYWWHSPLNMRGY 367
           FWYSWR+Q+ EF   Y   + ++ RGY
Sbjct: 151 FWYSWRFQLKEFADKYRCVA-IDQRGY 176


>Z81037-7|CAB02744.2|  431|Caenorhabditis elegans Hypothetical
           protein C17E4.3 protein.
          Length = 431

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -2

Query: 392 IFNSFGNLRILACSTGYATNNLS*IPKFGISMNTRNSGKP 273
           + +SFG   +++CST  A NNL  +    IS++T  SG P
Sbjct: 357 VCSSFGT-GVMSCSTPVADNNLRTLTPSPISLSTFKSGCP 395


>Z79605-4|CAB01902.2|  557|Caenorhabditis elegans Hypothetical
           protein ZK678.5 protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +1

Query: 463 P*ESGILVLRHGTGEGDSEMAITKMAYSPKIVQRTDYV*PQPCSNPAGFLFPRKYGKQ 636
           P E+G LV+  G   G  E+ I ++      VQ T+   P P     GF+ P+ +  Q
Sbjct: 241 PVETGQLVVPQGVQNGQ-EVIIEEIVAQEGFVQETNPQPPPPPGQQGGFVQPQGFQPQ 297


>Z35598-1|CAA84656.1| 1343|Caenorhabditis elegans Hypothetical protein
            F10F2.2 protein.
          Length = 1343

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 19/72 (26%), Positives = 30/72 (41%)
 Frame = +1

Query: 460  GP*ESGILVLRHGTGEGDSEMAITKMAYSPKIVQRTDYV*PQPCSNPAGFLFPRKYGKQI 639
            GP    I++  H   +G    AI +MA++  +    D   P     P   LF  + G  +
Sbjct: 901  GPLRKPIILAGHDISDGGLLTAILEMAFAGNVSIDIDIKPPNQNIKPIDILFAEECGILL 960

Query: 640  SKASSLNVLGNF 675
              ++  NVL  F
Sbjct: 961  EVSNPENVLHIF 972


>U61236-1|AAB17541.1|  557|Caenorhabditis elegans M75 protein.
          Length = 557

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +1

Query: 463 P*ESGILVLRHGTGEGDSEMAITKMAYSPKIVQRTDYV*PQPCSNPAGFLFPRKYGKQ 636
           P E+G LV+  G   G  E+ I ++      VQ T+   P P     GF+ P+ +  Q
Sbjct: 241 PVETGQLVVPQGVQNGQ-EVIIEEIVAQEGFVQETNPQPPPPPGQQGGFVQPQGFQPQ 297


>U23450-6|AAK31469.1|  790|Caenorhabditis elegans Hypothetical
           protein C30B5.5 protein.
          Length = 790

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +1

Query: 16  QYIYRFVVTNALTLFYGFLTLVIF 87
           Q +Y   VTN + +F+ FLTL++F
Sbjct: 177 QQVYSLWVTNFVMVFFPFLTLLLF 200


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,547,853
Number of Sequences: 27780
Number of extensions: 462642
Number of successful extensions: 836
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)