Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0651
         (889 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   7.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.8  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.8  

>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 522 QTEVLDRRKLFGSSLPYSPNFWH 454
           Q +  D  K+F   + + PN+WH
Sbjct: 75  QKQKEDVHKVFQHLMIHRPNWWH 97


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 514  FSLYPQFMYHLRRSQFLQVFNNSPDET 594
            F+L P   YH+R     ++ ++ P ET
Sbjct: 959  FTLRPATTYHIRIVAENEIGSSEPSET 985


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/35 (22%), Positives = 16/35 (45%)
 Frame = +1

Query: 745 TLLSNIIYHGETIAQXRGLRNKTCRSTRTSRNCXG 849
           +L+ +   +G+ + + + L NK C        C G
Sbjct: 197 SLIHSTHLNGDIVKEHQNLHNKICNLIDEFNECFG 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,181
Number of Sequences: 336
Number of extensions: 4247
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)