Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0651
(889 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968 119 4e-27
08_02_0993 + 23390237-23390516,23391261-23391438,23391865-233919... 117 1e-26
09_04_0408 + 17352110-17352619,17352709-17352834,17353036-173532... 116 3e-26
11_04_0096 + 13435988-13436803,13436880-13437053,13437673-134378... 110 2e-24
01_06_1398 - 37027659-37028112,37028393-37028460,37028543-37028908 30 2.1
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 30 2.8
10_01_0147 - 1722947-1723168,1723268-1723464,1723654-1723690,172... 29 3.7
08_01_0500 + 4338111-4338195,4339910-4340042,4340116-4340187,434... 29 6.5
04_03_0263 - 13605195-13607366,13607535-13607702 29 6.5
02_01_0081 - 562163-564406 29 6.5
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 28 8.6
>03_05_1085 + 30275567-30276178,30277024-30278680,30278835-30278968
Length = 800
Score = 119 bits (286), Expect = 4e-27
Identities = 61/98 (62%), Positives = 71/98 (72%), Gaps = 1/98 (1%)
Frame = +1
Query: 511 NFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGXPP 690
NFSLYPQFMY+LRRSQF+ VFN+SPDET F+R ML RE + SLIMIQP L+ YSF PP
Sbjct: 570 NFSLYPQFMYYLRRSQFIDVFNSSPDETAFFRLMLNREGVVGSLIMIQPTLFQYSFDGPP 629
Query: 691 EPVLLDTSSIQADRI-L*XTLLSNIIYHGETIAQXRGL 801
PVLLD SSI D I L + +I++G IAQ R L
Sbjct: 630 IPVLLDVSSISPDVILLFDSYFYIVIHYGSKIAQWRKL 667
Score = 93.1 bits (221), Expect = 3e-19
Identities = 48/79 (60%), Positives = 55/79 (69%)
Frame = +2
Query: 263 GQRRVRVTTVARNWGDAAVSLHHIAAGFDQEAAAVVMARLVVYRAEIEDGPDVLRWLDRM 442
G R+RVTTVAR W A IAAGFDQEAAA VMARL V+RAE DV+RWLD+M
Sbjct: 489 GSYRLRVTTVARRW--AGPRSPEIAAGFDQEAAAAVMARLAVHRAETYHVRDVIRWLDKM 546
Query: 443 LIRLCQKFGEYGKDDPNSF 499
LIR KFG Y +DP++F
Sbjct: 547 LIRFTAKFGNYVPEDPSTF 565
Score = 71.7 bits (168), Expect = 7e-13
Identities = 36/84 (42%), Positives = 51/84 (60%)
Frame = +3
Query: 3 FNGTLEVKCSRELKISGAIGSCVSLNVKGPCVSDQEVGMGNTCQWKLCTFTPSTTMSIFF 182
FN T+E+ SRE+KI GA+G C+SL+ K VSD+E+G G T WK+ T T + FF
Sbjct: 403 FNATIEIVTSREVKICGALGPCISLHRKNSSVSDKEIGEGGTNYWKMSTVDSKTCIVFFF 462
Query: 183 EVANQASTVPQGGRGCVQFITQYQ 254
V +T P +QF+T+Y+
Sbjct: 463 RVDCSHNTEPP-TVFFIQFMTRYR 485
>08_02_0993 +
23390237-23390516,23391261-23391438,23391865-23391940,
23392037-23392212,23392296-23392377,23392639-23392716,
23393525-23393686,23393980-23394243,23394698-23394802,
23395304-23395447
Length = 514
Score = 117 bits (281), Expect = 1e-26
Identities = 56/94 (59%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
Frame = +1
Query: 517 SLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGXPPEP 696
S++PQFM++LRRSQF+QVFNNSPDET ++R ML RE++ +++MIQP L SYSF PEP
Sbjct: 328 SIFPQFMFNLRRSQFVQVFNNSPDETAYFRMMLNRENVANAVVMIQPSLISYSFQSGPEP 387
Query: 697 VLLDTSSIQADRI-L*XTLLSNIIYHGETIAQXR 795
VLLD ++I ADRI L + + +I+HG TIAQ R
Sbjct: 388 VLLDVTAIAADRILLLDSYFTIVIFHGITIAQWR 421
Score = 89.8 bits (213), Expect = 2e-18
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = +2
Query: 263 GQRRVRVTTVARNWGDAAVSLHHIAAGFDQEAAAVVMARLVVYRAEIEDGPDVLRWLDRM 442
GQ R+R TT++R W + + + GFDQEAAA VMARLV ++ E E D +RWLDR
Sbjct: 243 GQMRLRATTLSRRWVAGSGGVQDLIDGFDQEAAAAVMARLVSFKMEAEADFDPIRWLDRA 302
Query: 443 LIRLCQKFGEYGKDDPNSF 499
LI +C KFG+Y K+ P+SF
Sbjct: 303 LISMCSKFGDYQKETPSSF 321
Score = 71.7 bits (168), Expect = 7e-13
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +3
Query: 3 FNGTLEVKCSRELKISGAIGSCVSLNVKGPCVSDQEVGMGNTCQWKLCTFTPSTTMSIFF 182
FNG E+ CS+++KI G IG C SL K P SD VG G+T WK+C T++ + F
Sbjct: 152 FNGIFEINCSKDVKIQGIIGPCTSLEKKSPLSSDTVVGQGSTSAWKMCGLDRKTSICLVF 211
Query: 183 EVANQ----ASTVPQGGRGCVQFITQYQ 254
++A + A + + QF+T YQ
Sbjct: 212 DIAKKDGPDAISQSTSNQFYFQFLTYYQ 239
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 807 QDMPEYENFAQLLRAPXDDAQEILQNK 887
QD +E FAQLL+AP ++ I++ +
Sbjct: 426 QDQQGHEAFAQLLKAPREETDSIIKER 452
>09_04_0408 +
17352110-17352619,17352709-17352834,17353036-17353209,
17353669-17353830,17353998-17354140,17354835-17354910,
17355445-17355589,17355847-17355896,17356001-17356078,
17357153-17357314,17357406-17357669,17357929-17358033,
17358158-17358247,17358344-17358346
Length = 695
Score = 116 bits (279), Expect = 3e-26
Identities = 55/94 (58%), Positives = 75/94 (79%), Gaps = 1/94 (1%)
Frame = +1
Query: 517 SLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGXPPEP 696
S++PQF+++LRRSQF+QVFNNSPDET ++R +L RED+T +++MIQP L SYSF PEP
Sbjct: 526 SIFPQFVFNLRRSQFVQVFNNSPDETAYFRMVLDREDVTNAVVMIQPSLISYSFQSGPEP 585
Query: 697 VLLDTSSIQADRI-L*XTLLSNIIYHGETIAQXR 795
VLLD ++I AD+I L + + +I+HG TIAQ R
Sbjct: 586 VLLDVTAIAADKILLLDSYFTVVIFHGITIAQWR 619
Score = 78.6 bits (185), Expect = 6e-15
Identities = 35/61 (57%), Positives = 45/61 (73%)
Frame = +2
Query: 317 VSLHHIAAGFDQEAAAVVMARLVVYRAEIEDGPDVLRWLDRMLIRLCQKFGEYGKDDPNS 496
+ + + GFDQEAAA VMARLV ++ E E D +RWLDR LIRLC KFG+Y K++P+S
Sbjct: 459 LKIKELIGGFDQEAAAAVMARLVSFKMETEADFDPIRWLDRALIRLCSKFGDYQKENPSS 518
Query: 497 F 499
F
Sbjct: 519 F 519
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Frame = +3
Query: 3 FNGTLEVKCSRELKISGAIGSCVSLNVKGPCVSDQEVGMGNTCQWKLCTFTPSTTMSIFF 182
FNG LE+ CS+++KI G IG C SL K P SD +G GNT WK+C T++ + +
Sbjct: 371 FNGILEINCSKDVKIQGIIGPCASLEKKSPLSSDTVIGQGNTSAWKMCGLDKKTSLCLVY 430
Query: 183 EVANQ--ASTVPQGGRGCVQFI 242
++A + ++T+ Q V FI
Sbjct: 431 DIAKKDGSNTIGQAA-NVVDFI 451
>11_04_0096 +
13435988-13436803,13436880-13437053,13437673-13437834,
13438548-13438690,13439059-13439134,13439231-13439403,
13439482-13439563,13439949-13440026,13440369-13440461,
13441026-13441187,13441225-13441530,13442265-13442369,
13443097-13443243
Length = 838
Score = 110 bits (264), Expect = 2e-24
Identities = 60/112 (53%), Positives = 74/112 (66%), Gaps = 15/112 (13%)
Frame = +1
Query: 511 NFSLYPQFMYHLRRSQFLQ--------------VFNNSPDETTFYRHMLMREDLTQSLIM 648
NFSL+PQFM++LRRSQF+Q VFNNSPDET ++R +L RE +T S+ M
Sbjct: 635 NFSLFPQFMFNLRRSQFVQEILALLILAFSLSQVFNNSPDETAYFRMLLNRESITNSVAM 694
Query: 649 IQPILYSYSFGXPPEPVLLDTSSIQADRI-L*XTLLSNIIYHGETIAQXRGL 801
IQP L S+SF PP PV LD +SI ADRI L S +I+HG TIAQ R +
Sbjct: 695 IQPSLISFSFDLPPSPVFLDVASIAADRILLLDAYFSVVIFHGMTIAQWRNM 746
Score = 84.2 bits (199), Expect = 1e-16
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Frame = +3
Query: 3 FNGTLEVKCSRELKISGAIGSCVSLNVKGPCVSDQEVGMGNTCQWKLCTFTPSTTMSIFF 182
FNGTLE+ CS+++K+ G IG C SL KG +D VG GNT WK+C +T++++FF
Sbjct: 431 FNGTLEINCSKDIKVQGIIGPCTSLEKKGALCADTVVGQGNTTAWKMCGLDRNTSLTVFF 490
Query: 183 EVA-NQASTVP--QGGRGCVQFITQYQ 254
+V+ ++ S+ P Q +QF+T YQ
Sbjct: 491 DVSPSERSSQPGHQNPDLYIQFVTSYQ 517
Score = 55.2 bits (127), Expect(2) = 3e-17
Identities = 23/48 (47%), Positives = 32/48 (66%)
Frame = +2
Query: 263 GQRRVRVTTVARNWGDAAVSLHHIAAGFDQEAAAVVMARLVVYRAEIE 406
GQ R+RVTT+ R W D + + + GFDQE AAVV+AR + + E+E
Sbjct: 521 GQMRIRVTTICRKWVDGSTNTEELVEGFDQETAAVVLARYISLKMEME 568
Score = 51.2 bits (117), Expect(2) = 3e-17
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 416 DVLRWLDRMLIRLCQKFGEYGKDDPNSF 499
D RWLDR LIRLC +FG+Y KDDP+SF
Sbjct: 603 DATRWLDRSLIRLCSRFGDYRKDDPSSF 630
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = +3
Query: 807 QDMPEYENFAQLLRAPXDDAQEILQNK 887
Q+ PE++ FAQLL+AP ++AQ I++ +
Sbjct: 749 QNQPEHQQFAQLLQAPHEEAQIIIKGR 775
>01_06_1398 - 37027659-37028112,37028393-37028460,37028543-37028908
Length = 295
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = +2
Query: 203 DGTPRWSRLRTVHHAVSDSSGQRRVRVTT-VARNWGDAAVS 322
DG RW+R R + A +G+R + T ++R WG A++
Sbjct: 69 DGNARWARARGLPSAAGHEAGRRALEETVRLSRAWGIRALT 109
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 550 RSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGXPPEPVLLDTSSI 720
R FL+ +SP++ R + + ++L Q LY FG PEP ++SI
Sbjct: 296 REDFLKAKKHSPEDKEIQRELRSLAEQDKALYQKQKELYKGLFGPRPEPKPKASNSI 352
>10_01_0147 -
1722947-1723168,1723268-1723464,1723654-1723690,
1724688-1725584
Length = 450
Score = 29.5 bits (63), Expect = 3.7
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = +2
Query: 236 VHHAVSDSSGQRRVRVTTVARNWGDAAVSLHHIAAGFDQEAAAVVMARLVVYRAEIEDGP 415
+HH +S ++ VR ++R W + ++ I A FD+ LV Y+ + ED
Sbjct: 26 LHHIMSFLDARQAVRTCVLSRRWRNLWRTVPCINADFDE-------FDLVFYQGDDEDYD 78
Query: 416 DVL---RWLDRML 445
DVL R+++R+L
Sbjct: 79 DVLAFKRFVNRLL 91
>08_01_0500 +
4338111-4338195,4339910-4340042,4340116-4340187,
4340524-4340587,4341383-4341459,4341586-4341657,
4341741-4341853,4341995-4342126,4342204-4342545,
4342628-4343022,4343293-4343603,4343967-4344066
Length = 631
Score = 28.7 bits (61), Expect = 6.5
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = -1
Query: 736 VCGPLVLRTCPGGP---APGDXRSCTSTRSAGS*SETGS 629
+CGP + CPG P P T +S GS S TG+
Sbjct: 175 LCGPGTTKPCPGAPPFSPPPPYNPPTPVQSPGSSSSTGA 213
>04_03_0263 - 13605195-13607366,13607535-13607702
Length = 779
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 722 CIEDVSRRTGSGGXPKLYEYKIG 654
C ED S++ G GG ++E KIG
Sbjct: 466 CTEDFSKKLGEGGFGSVFEGKIG 488
>02_01_0081 - 562163-564406
Length = 747
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 97 YLIRRSEWATRVNGSYVLSPPVLPCP 174
Y+IRR W TR+ S L P L P
Sbjct: 76 YMIRRRPWTTRLENSIRLLSPTLAAP 101
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 28.3 bits (60), Expect = 8.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 550 RSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGXPPEP 696
R FL+ SP++ R + + ++L Q LY FG PEP
Sbjct: 303 REDFLKAKKYSPEDKEIQRELRSLAEQDKALYQKQKELYKGLFGPRPEP 351
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,490,032
Number of Sequences: 37544
Number of extensions: 545677
Number of successful extensions: 1596
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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