Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0651
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132858-2|CAB60476.2|  821|Caenorhabditis elegans Hypothetical ...   140   1e-33

>AL132858-2|CAB60476.2|  821|Caenorhabditis elegans Hypothetical
           protein Y113G7A.3 protein.
          Length = 821

 Score =  140 bits (339), Expect = 1e-33
 Identities = 66/97 (68%), Positives = 78/97 (80%), Gaps = 1/97 (1%)
 Frame = +1

Query: 508 ENFSLYPQFMYHLRRSQFLQVFNNSPDETTFYRHMLMREDLTQSLIMIQPILYSYSFGXP 687
           + FSL+PQFM+HLRRSQFLQVFNNSPDET +YRH+L  E++ +S  MIQP+L+SYSF  P
Sbjct: 630 DKFSLFPQFMFHLRRSQFLQVFNNSPDETAYYRHILFSENVLESTTMIQPVLFSYSFNGP 689

Query: 688 PEPVLLDTSSIQADRI-L*XTLLSNIIYHGETIAQXR 795
           PEPVLLDTSSI ADRI L       +IYHG+TIAQ R
Sbjct: 690 PEPVLLDTSSILADRILLMDDYFHVLIYHGQTIAQWR 726



 Score =  113 bits (271), Expect = 2e-25
 Identities = 53/82 (64%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
 Frame = +2

Query: 257 SSGQRRVRVTTVARNWGDAAVSLHHIAAGFDQEAAAVVMARLVVYRAEIE-DGPDVLRWL 433
           + G++R+RVTT  R W D A    +IA GFDQEAAAV +ARL  +RA  E D P+ LRWL
Sbjct: 545 ADGRKRIRVTTTCRTWADMATQQPNIAYGFDQEAAAVAIARLASFRASNENDTPEALRWL 604

Query: 434 DRMLIRLCQKFGEYGKDDPNSF 499
           DR LIRLCQKFGEY KDDPNSF
Sbjct: 605 DRSLIRLCQKFGEYSKDDPNSF 626



 Score =  105 bits (253), Expect = 3e-23
 Identities = 48/85 (56%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
 Frame = +3

Query: 3   FNGTLEVKCSRELKISGAIGSCVSLNVKGPCVSDQEVGMGNTCQWKLCTFTPSTTMSIFF 182
           FN T+EVK    LKI G +G C S NV+   VSDQE+G+G TCQWK    +P TT+ + F
Sbjct: 459 FNATMEVKVGAGLKIEGVLGCCASGNVRNANVSDQEMGIGGTCQWKFGAISPRTTIGVVF 518

Query: 183 EVANQ-ASTVPQGGRGCVQFITQYQ 254
           E+A Q  S +PQGGRG VQF+TQYQ
Sbjct: 519 EIAAQHGSAIPQGGRGMVQFVTQYQ 543



 Score = 30.3 bits (65), Expect = 1.9
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +3

Query: 816 PEYENFAQLLRAPXDDAQEILQNK 887
           P+Y  F QLL AP  DA  ILQ +
Sbjct: 734 PQYATFKQLLEAPVADATSILQER 757


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,900,628
Number of Sequences: 27780
Number of extensions: 430372
Number of successful extensions: 1202
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1199
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)