Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0650
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   3.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   8.2  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.2  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = +2

Query: 650 ETHQAVPRCAPRASRHQHRRE 712
           E     PR  PRA+ HQ R E
Sbjct: 308 EKTNIAPRERPRATDHQRRNE 328


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = -3

Query: 685 PWSTSWHGLVC 653
           PW  S HG VC
Sbjct: 471 PWKPSMHGGVC 481


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +3

Query: 183 NEYCIFSIIMYFVAF*IM 236
           N+YC F I+ Y   F I+
Sbjct: 319 NKYCNFIILFYLSVFVIL 336


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 188 ILYLFNNYVFCCLLNYVINLYFF 256
           +L+L   Y F C L  ++ +Y+F
Sbjct: 279 LLFLLCIYYFYCALIILLCIYYF 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,872
Number of Sequences: 336
Number of extensions: 3501
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)