Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0650
         (765 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0677 + 35476009-35476014,35476974-35477474,35477574-354777...    32   0.58 
07_01_0088 + 684471-685154,685271-685834,685938-686222                 29   4.1  
01_05_0125 - 18382402-18382761,18382863-18383036                       28   7.1  
09_06_0071 - 20675501-20675830,20676120-20676286,20676472-206766...    28   9.4  
04_04_0207 + 23602065-23604315,23604611-23605116                       28   9.4  
03_04_0133 + 17585278-17585282,17586257-17586386,17587444-175875...    28   9.4  

>03_06_0677 +
           35476009-35476014,35476974-35477474,35477574-35477762,
           35477925-35477945
          Length = 238

 Score = 31.9 bits (69), Expect = 0.58
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
 Frame = +1

Query: 553 FGKPTNSQDALVNET--KK*PL-PRHSTSSXRKTGRNTPSRAKMCS----TGIAPSTPQG 711
           +G  TN  +A V +T  +K P+ PRH   +  K G ++PSR +  S     G AP+TP  
Sbjct: 99  YGDHTNYDNA-VRKTGIEKSPVHPRHQARAANKGGVSSPSRDRRGSLEGNRGSAPTTPGR 157

Query: 712 TLLRNRXRXDG*XAPRRG 765
           +  R+  R D    P RG
Sbjct: 158 SKFRSTGRGD--ETPDRG 173


>07_01_0088 + 684471-685154,685271-685834,685938-686222
          Length = 510

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 479 EPFAGSPPPPKIHSSTYATLNRI 547
           +P   SP P ++HSS YA+L  I
Sbjct: 61  DPLGASPAPVRVHSSMYASLRLI 83


>01_05_0125 - 18382402-18382761,18382863-18383036
          Length = 177

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
 Frame = +2

Query: 425 KDGFTLPVWMKTKPTKEFEPFAGSPPPPKIHSSTYATLNRIY-----YLGN--PRIVKTR 583
           +D   L V  +  P    E  +G PP      +   T++R+Y      L N  PR   TR
Sbjct: 4   EDNLALSVVCERSPGTAVEAASGRPPKAGSERARRQTMSRLYDELGALLPNLPPRASTTR 63

Query: 584 L*TKRRSDRCLGIQRRQXERLVETHQAVPRCAPRASR 694
           +     +  C+G  R +   L E + AV   A RA+R
Sbjct: 64  I--VEEAIACVGELRARTAEL-EAYSAVAAAAGRAAR 97


>09_06_0071 -
           20675501-20675830,20676120-20676286,20676472-20676619,
           20676768-20677205,20677667-20677741,20678000-20678283,
           20678940-20679159
          Length = 553

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = -1

Query: 504 GGGDPANGSNSFVGFVFIHTGSVNPSLISGSL 409
           G   PA+      GF ++H+ S NP++  G+L
Sbjct: 474 GASIPADAKTGCKGFQYLHSTSPNPNVAMGAL 505


>04_04_0207 + 23602065-23604315,23604611-23605116
          Length = 918

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = -1

Query: 447 TGSVNPSLISGSLEAIFI 394
           TG V PSL+SG+L A+F+
Sbjct: 482 TGRVPPSLVSGALPAVFL 499


>03_04_0133 +
           17585278-17585282,17586257-17586386,17587444-17587591,
           17587661-17587849,17587999-17589150,17589303-17589466
          Length = 595

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +1

Query: 607 PLPRHSTSSXRKTGRNTPSRAKMCSTGIAPSTP 705
           P   H T   ++   N P  +K+ STG+ P +P
Sbjct: 88  PSNSHVTDVGKENMLNNPEESKIASTGLKPGSP 120


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,767,848
Number of Sequences: 37544
Number of extensions: 353200
Number of successful extensions: 1088
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1085
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)