Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0650
         (765 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          25   1.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   3.1  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   5.4  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    22   7.2  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -1

Query: 495 DPANGSNSFVGFVFIHTGSVNPSLISGSLEAIFIT 391
           DP   S++++GF+F+    V    I  S  AI +T
Sbjct: 57  DPVTNSDTYIGFLFVLGLIVPVFTIVSSYAAIVLT 91


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 19/94 (20%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
 Frame = +2

Query: 428  DGFTLPVWMKTKPTKEFEPFAGSPPPPKIHSSTYATLNRI-YYLGNPRIVKTRL*TKRRS 604
            +G  +P +M+  P   F PF    PPP + S   A    +   L       +R+   +  
Sbjct: 1142 NGIKMPSFMEGMPHLPFTPFNFWNPPPFMPSPFMAGAPNVPTILPEQYFATSRIRGLQEQ 1201

Query: 605  DRCLGIQRRQXERLVETHQAVPRCAPRASRHQHR 706
             R   + ++Q ++  +  Q   +   +  + QH+
Sbjct: 1202 QRNAAMVQQQQQQQQQQQQQQQQQQQQQQQQQHQ 1235


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -3

Query: 670 WHG--LVCFDQSFSLTTLNAEAAVTSSFRSQARLDYSWVSQI 551
           W G  ++C D    L  LN E  +     +QAR+    VSQ+
Sbjct: 285 WPGCEVICEDYQAFLKHLNTEHTLDDRSTAQARVRMQVVSQL 326


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 627 VVXEKDWSKHTKPCQDVLH 683
           VV E DWS  T+    VLH
Sbjct: 216 VVGEHDWSSKTETNATVLH 234


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -2

Query: 341 FNKYNKQTTRQFNTKWYY 288
           +N YN      +N K YY
Sbjct: 330 YNNYNNNNYNNYNKKLYY 347


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 188 ILYLFNNYVFCCLLNYVINLYFF 256
           + Y+FN  + C L+N V  L F+
Sbjct: 214 MFYVFNLILPCILINSVALLVFY 236


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,973
Number of Sequences: 438
Number of extensions: 4291
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)