Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0648
         (747 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    25   1.00 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.0  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    23   4.0  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    23   4.0  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    23   4.0  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   7.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   7.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   7.0  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   9.3  

>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
 Frame = +2

Query: 617 LKIRYEPTSEAGPGIHDQRQL---CRFTTLKRC 706
           LK+ +EP    GPG    R      RF +L RC
Sbjct: 48  LKLAFEPRRNPGPGSKGPRDFPRSHRFKSLPRC 80


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 564 PYRTTSASNTSXGQAQLTLRYGMNPHQKPAQVFTTRDSFA 683
           PYR      T    A+LT  Y  +  +KP Q      SF+
Sbjct: 91  PYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFS 130


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 53  LLSLAKSLSECGLQLIASGGTARXLRNA 136
           LLS  +S+SEC L   +S  +    RN+
Sbjct: 166 LLSKRRSVSECSLGTASSTSSTASSRNS 193


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 563 AISDYFRKQYFARASPTD 616
           A+SD  R  YFAR  P D
Sbjct: 105 ALSDKTRFDYFARTVPPD 122


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = +2

Query: 563 AISDYFRKQYFARASPTD 616
           A+SD  R  YFAR  P D
Sbjct: 195 ALSDKTRFDYFARTVPPD 212


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +2

Query: 173 APEMLGGRVKTLHPAV 220
           AP MLGGR  T +  V
Sbjct: 340 APHMLGGRTDTTYRVV 355


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 235  SSIIRLCQEDMKR 273
            +SII+ C EDMKR
Sbjct: 1304 TSIIKDCVEDMKR 1316


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 643 RSRPRYSRPETALPIHDTETVRLD 714
           R  PRY RP T      T++   D
Sbjct: 154 RHHPRYKRPRTTFEPRATDSRHYD 177


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 659 YLGRLLMWVHTVS*GQ 612
           Y G +  W HTVS G+
Sbjct: 8   YYGDVYQWNHTVSSGE 23


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,090
Number of Sequences: 438
Number of extensions: 3797
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)