Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0645
(850 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0) 73 4e-13
SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07) 32 0.51
SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3) 31 0.89
SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18) 31 0.89
SB_21655| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-30) 31 1.2
SB_50363| Best HMM Match : PHO4 (HMM E-Value=0) 31 1.6
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 30 2.1
SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36) 30 2.1
SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36) 30 2.1
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 30 2.1
SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07) 30 2.1
SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36) 30 2.1
SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32) 30 2.1
SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32) 30 2.1
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11) 30 2.1
SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21) 30 2.1
SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36) 30 2.1
SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15) 30 2.7
SB_33553| Best HMM Match : DUF101 (HMM E-Value=3.7) 30 2.7
SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36) 30 2.7
SB_19549| Best HMM Match : DUF101 (HMM E-Value=3.7) 30 2.7
SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.7
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 30 2.7
SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18) 30 2.7
SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36) 29 4.8
SB_34318| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-30) 29 4.8
SB_52890| Best HMM Match : PH (HMM E-Value=1e-06) 29 6.3
SB_43044| Best HMM Match : zf-C2H2 (HMM E-Value=0.83) 29 6.3
SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43) 29 6.3
SB_41028| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_35827| Best HMM Match : zf-C2H2 (HMM E-Value=0.83) 29 6.3
SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06) 29 6.3
SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 6.3
SB_12029| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_6798| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_5933| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_4450| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_3826| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 6.3
SB_2170| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07) 29 6.3
SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43) 29 6.3
SB_49894| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 6.3
SB_43612| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_42594| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 6.3
SB_39589| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_37146| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_36046| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 6.3
SB_30624| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 6.3
SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42) 29 6.3
SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3) 29 6.3
SB_2346| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.3
SB_53772| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 28 8.3
SB_38291| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.3
>SB_23885| Best HMM Match : Peptidase_S10 (HMM E-Value=0)
Length = 446
Score = 72.5 bits (170), Expect = 4e-13
Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 4/156 (2%)
Frame = +1
Query: 265 SNQFFWYFPAMVPNSK--NAPVIVWLQGGPGATSL-YGLFTENGPIWVRNKKFERRKYNW 435
++ F+W + A S+ N P+I+WLQGGPG +S YG F E GP+ V K R +W
Sbjct: 44 AHMFWWLYGARGEPSERENKPLILWLQGGPGGSSTGYGNFMELGPLDVNLK---LRNTSW 100
Query: 436 ALSHHIIYIDNPVGTGFSFTKNPKATVLMRLKLANSYTPLXXXXXXCFQNFKPI-IFL*L 612
+++++DNPVG GFS+ + A +A + F+ I +++
Sbjct: 101 VEVANVLFVDNPVGAGFSYVTDKGAYTTNVTGIAQDLLTMFKAFVNEMPAFQTIPLYIFC 160
Query: 613 ENHMEESMYQLWAYTIHXKNPTAQIKINMKGIAIGN 720
E++ M + T++ +I+ N KG+A+G+
Sbjct: 161 ESY-GGKMTSAFGVTLYNAIQQGEIRCNFKGVALGD 195
>SB_31326| Best HMM Match : rve (HMM E-Value=6.1e-07)
Length = 330
Score = 32.3 bits (70), Expect = 0.51
Identities = 19/36 (52%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = +1
Query: 10 HEAIRH--VSSFVVDNHFVRXPGLPASLSEIKSRRA 111
HE++ H V+ F NHFVR LP SL EIKS +A
Sbjct: 193 HESLCHPGVTRF---NHFVRTKNLPYSLEEIKSMKA 225
>SB_9645| Best HMM Match : DUF101 (HMM E-Value=4.3)
Length = 360
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H S NHFVR LP SL EIKS
Sbjct: 263 HESLCH-SGVTRLNHFVRTKNLPYSLEEIKS 292
>SB_43370| Best HMM Match : RhoGAP (HMM E-Value=1.6e-18)
Length = 865
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = +1
Query: 643 LWAYTIHXKNPTAQIKINMKGIAIGNGLSDLYISSCMVNIVS 768
L+A I+ K+P+A +K + +G+SDL +SS +V++V+
Sbjct: 669 LYAEGIYRKSPSAVAVRALKNAIVSSGISDLDLSSHVVHVVA 710
>SB_21655| Best HMM Match : 7tm_1 (HMM E-Value=9.6e-30)
Length = 343
Score = 31.1 bits (67), Expect = 1.2
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = -2
Query: 783 SIXPIGYDIYHTRADVQVTQXIXYCNTLHINFNLCCR-IFLVNCVGPELVHTFLHMILQS 607
S P+ YDI+ T + + + C NF C R IF N +GP + T LQ+
Sbjct: 277 SYLPVMYDIFVTMSFMSFVINLYICFMFSENFRKCLRQIFCRNRIGPITISTQATRSLQN 336
Query: 606 Q 604
+
Sbjct: 337 R 337
>SB_50363| Best HMM Match : PHO4 (HMM E-Value=0)
Length = 608
Score = 30.7 bits (66), Expect = 1.6
Identities = 51/180 (28%), Positives = 77/180 (42%), Gaps = 10/180 (5%)
Frame = -2
Query: 780 IXPIGYDIYHTRADVQVTQXIXYC-NTLHINFNL--CCRIFLVNCVG--PELV-HTFLHM 619
I IGYD+Y DV + I +L I NL CC I +VN G +LV + L +
Sbjct: 183 IASIGYDVYQLLTDVVKPKIIVVAYESLKIKENLSWCCEIVVVNGAGRTDKLVAYESLEL 242
Query: 618 -ILQSQKNYWFEVLETTGRTGSEWSITVR-QLESHQHSSFRIFSETESSANRVVNVYNMM 445
+L K + VL T +G ++ VR L RI E + V +Y
Sbjct: 243 QMLHFNKIPLYGVLILTFGSGIVTALFVRFYLVGFMRR--RIIREVDQLGIDVKAMYTPD 300
Query: 444 TEGPVILSSLKLLI-ANPYRTV-FCEESIQRCSARASLEPDDNRCVFAVRNHSRKVPEEL 271
+ +L ++++I N TV E S + +A S++P+ N + N K EL
Sbjct: 301 VDPAELLQRVEVIIEENEDLTVHIFEISDEVEAAEKSVDPEANGDTSKLSNGVTKPAREL 360
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 791 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 824
>SB_53279| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 337
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 75 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 108
>SB_49675| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 412
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 60 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 93
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 838 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 871
>SB_30405| Best HMM Match : rve (HMM E-Value=5.1e-07)
Length = 409
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 249 HESLCHPGVTRL-NHFVRTKNLPYSLGEIKSMTSK 282
>SB_15390| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 748
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 393 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 426
>SB_10309| Best HMM Match : rve (HMM E-Value=9.6e-32)
Length = 546
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 220 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 253
>SB_1714| Best HMM Match : rve (HMM E-Value=9.6e-32)
Length = 517
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 220 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 253
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 939 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 972
>SB_35114| Best HMM Match : RVT_1 (HMM E-Value=2.2e-11)
Length = 512
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 348 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 381
>SB_9297| Best HMM Match : RVT_1 (HMM E-Value=7e-21)
Length = 1032
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 454 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 487
>SB_5024| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1677
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKSRRAR 114
HE++ H + NHFVR LP SL EIKS ++
Sbjct: 822 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKSMTSK 855
>SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)
Length = 615
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H + NHFVR LP SL EIKS
Sbjct: 388 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKS 417
>SB_33553| Best HMM Match : DUF101 (HMM E-Value=3.7)
Length = 252
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H + NHFVR LP SL EIKS
Sbjct: 220 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKS 249
>SB_26992| Best HMM Match : rve (HMM E-Value=6.3e-36)
Length = 1022
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H + NHFVR LP SL EIKS
Sbjct: 564 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKS 593
>SB_19549| Best HMM Match : DUF101 (HMM E-Value=3.7)
Length = 225
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H + NHFVR LP SL EIKS
Sbjct: 193 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKS 222
>SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H + NHFVR LP SL EIKS
Sbjct: 814 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKS 843
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H + NHFVR LP SL EIKS
Sbjct: 838 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKS 867
>SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18)
Length = 1046
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H + NHFVR LP SL EIKS
Sbjct: 234 HESLCHPGVTRL-NHFVRTKNLPYSLEEIKS 263
>SB_48115| Best HMM Match : rve (HMM E-Value=5.3e-36)
Length = 238
Score = 29.1 bits (62), Expect = 4.8
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +1
Query: 49 NHFVRXPGLPASLSEIKS 102
NHFVR LP SL EIKS
Sbjct: 6 NHFVRTKNLPYSLEEIKS 23
>SB_34318| Best HMM Match : 7tm_1 (HMM E-Value=9.4e-30)
Length = 343
Score = 29.1 bits (62), Expect = 4.8
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = -2
Query: 783 SIXPIGYDIYHTRADVQVTQXIXYCNTLHINFNLCCR-IFLVNCVGPELVHTFLHMILQS 607
S P+ YDI+ T + + C NF C R IF N +GP + T LQ+
Sbjct: 277 SYLPVMYDIFVTMSFMSFVINPYICFMFSENFRKCLRQIFCRNRIGPITISTQATRSLQN 336
Query: 606 Q 604
+
Sbjct: 337 R 337
>SB_52890| Best HMM Match : PH (HMM E-Value=1e-06)
Length = 449
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 95 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 127
>SB_43044| Best HMM Match : zf-C2H2 (HMM E-Value=0.83)
Length = 226
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 63 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 95
>SB_41884| Best HMM Match : RVT_1 (HMM E-Value=1.69557e-43)
Length = 677
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 535 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 567
>SB_41028| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 798
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 613 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 645
>SB_35827| Best HMM Match : zf-C2H2 (HMM E-Value=0.83)
Length = 223
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 63 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 95
>SB_34904| Best HMM Match : RVT_1 (HMM E-Value=1.1e-06)
Length = 530
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 367 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 399
>SB_14018| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 144 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 176
>SB_12029| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 192
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 29 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 61
>SB_6798| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 318
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 155 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 187
>SB_5933| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 11 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 43
>SB_4450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 247 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 279
>SB_3826| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 238
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 144 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 176
>SB_2170| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 11 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 43
>SB_57860| Best HMM Match : DUF1226 (HMM E-Value=1.5e-07)
Length = 754
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 63 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 95
>SB_53622| Best HMM Match : RVT_1 (HMM E-Value=7.90332e-43)
Length = 458
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 364 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 396
>SB_49894| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 226
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 63 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 95
>SB_45372| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2973
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 2455 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 2487
>SB_44400| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 328
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 144 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 176
>SB_43612| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 11 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 43
>SB_42594| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 186
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 23 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 55
>SB_42164| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 290
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 196 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 228
>SB_39589| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 11 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 43
>SB_37379| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 179 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 211
>SB_37146| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 11 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 43
>SB_36046| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 174
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 11 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 43
>SB_34465| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 280
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 144 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 176
>SB_30624| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 406
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 63 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 95
>SB_27308| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 179 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 211
>SB_25973| Best HMM Match : zf-C2H2 (HMM E-Value=0.42)
Length = 416
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V N + GLP + I+ RR RW G
Sbjct: 253 HWSDKVTKNEVLERSGLPTLFTLIRQRRLRWLG 285
>SB_17490| Best HMM Match : AT_hook (HMM E-Value=3.3)
Length = 348
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 196 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 228
>SB_2346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 28.7 bits (61), Expect = 6.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 25 HVSSFVVDNHFVRXPGLPASLSEIKSRRARWRG 123
H S V +N + GLP + ++ RR RW G
Sbjct: 63 HWSDKVTNNEVLERSGLPTLFTLLRQRRLRWLG 95
>SB_53772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 277 FWYFPAMVPNSKNAPVIVWL-QGGPGATSLYGLFTENGPIWVRNKKFERRKYNWALSHHI 453
FW+ + NS+ + WL QG P + G F G + ++ R WAL +
Sbjct: 10 FWFTEFLERNSQFS---AWLFQGRPNTFWMTGFFNPQGFLTAMRQEVTRAHKGWALDSVV 66
Query: 454 IYID 465
++ D
Sbjct: 67 LHND 70
>SB_19322| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4994
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 277 FWYFPAMVPNSKNAPVIVWL-QGGPGATSLYGLFTENGPIWVRNKKFERRKYNWALSHHI 453
FW+ + NS+ + WL QG P + G F G + ++ R WAL +
Sbjct: 4920 FWFTEFLERNSQFS---AWLFQGRPNTFWMTGFFNPQGFLTAMRQEVTRAHKGWALDSVV 4976
Query: 454 IYID 465
++ D
Sbjct: 4977 LHND 4980
>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 1048
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +1
Query: 10 HEAIRHVSSFVVDNHFVRXPGLPASLSEIKS 102
HE++ H + NHFVR LP L EIKS
Sbjct: 838 HESLCHPGVTRL-NHFVRTKNLPIPLKEIKS 867
>SB_38291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 277 FWYFPAMVPNSKNAPVIVWL-QGGPGATSLYGLFTENGPIWVRNKKFERRKYNWALSHHI 453
FW+ + NS+ + WL QG P + G F G + ++ R WAL +
Sbjct: 114 FWFTEFLERNSQFS---AWLFQGRPNTFWMTGFFNPQGFLTAMRQEVTRAHKGWALDSVV 170
Query: 454 IYID 465
++ D
Sbjct: 171 LHND 174
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,549,479
Number of Sequences: 59808
Number of extensions: 546934
Number of successful extensions: 1310
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1307
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2407378809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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