Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0645
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    25   0.88 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           25   0.88 
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    23   4.7  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   6.2  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.2  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   6.2  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   8.2  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 283 YFPAMVPNSKNAPVIVWLQGG 345
           Y PA    S++ PVI W+ GG
Sbjct: 111 YVPADRTPSQSLPVIFWIHGG 131


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 25.0 bits (52), Expect = 0.88
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 283 YFPAMVPNSKNAPVIVWLQGG 345
           Y PA    S++ PVI W+ GG
Sbjct: 111 YVPADRTPSQSLPVIFWIHGG 131


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
 Frame = +3

Query: 255 DLRLQPVLLVLSCYGSEQQKR--TGYRLAPRR---PGRYISVWTLHRKRS 389
           D R   V ++ +C     ++R    +R  P +    GRY S ++LH  RS
Sbjct: 396 DFRRAFVRILCACCPGRVRRRYQPAFRCKPSQRFASGRYYSAYSLHHVRS 445


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = +3

Query: 507 SYCVDETQVGEQLYSTLIQFFQLFPELQTNNFFVTGESYGGKYV 638
           +YC  +  +        IQ +Q   +   N+   T  +YGG  V
Sbjct: 270 TYCEPQVVIVSPTRELTIQIWQQIVKFSLNSILKTVVAYGGTSV 313


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 128 GEPLFLTPYVESGNITTGRRLARVP 202
           GEP+ +T  + SG + TG    R+P
Sbjct: 505 GEPVKITIGIHSGEVVTGVIGHRMP 529


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +2

Query: 128 GEPLFLTPYVESGNITTGRRLARVP 202
           GEP+ +T  + SG + TG    R+P
Sbjct: 505 GEPVKITIGIHSGEVVTGVIGHRMP 529


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/15 (60%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
 Frame = -3

Query: 311 LLF-GTIAGKYQKNW 270
           LLF GT+A  +Q NW
Sbjct: 8   LLFAGTVAADFQHNW 22


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,861
Number of Sequences: 438
Number of extensions: 5514
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)