Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0644
(902 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05) 47 2e-05
SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08) 46 3e-05
SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 1e-04
SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08) 44 2e-04
SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014) 43 4e-04
SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1) 42 5e-04
SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32) 41 0.001
SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15) 40 0.003
SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11) 38 0.011
SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.045
SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07) 36 0.045
SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.059
SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.078
SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083) 34 0.14
SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45) 34 0.18
SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34) 33 0.24
SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.32
SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34) 32 0.73
SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23) 32 0.73
SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33) 31 0.96
SB_7201| Best HMM Match : ketoacyl-synt (HMM E-Value=0) 31 1.7
SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_8042| Best HMM Match : DUF803 (HMM E-Value=0) 30 2.9
SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33) 29 3.9
SB_30795| Best HMM Match : Epimerase (HMM E-Value=0) 29 6.8
SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05) 29 6.8
SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14) 29 6.8
SB_916| Best HMM Match : GatB_Yqey (HMM E-Value=9.5) 29 6.8
SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.8
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 28 9.0
>SB_58732| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 48.4 bits (110), Expect = 8e-06
Identities = 24/64 (37%), Positives = 34/64 (53%)
Frame = +2
Query: 50 SATLNMERELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKH 229
S ++E ++ +TGGA GIG + ++ EGA V ILDIN E GQ +L+S
Sbjct: 13 SIRAHLEGRFHGRVAIVTGGASGIGKATVERLAREGASVAILDINDELGQQVETDLRSSG 72
Query: 230 GATK 241
K
Sbjct: 73 NKVK 76
>SB_32676| Best HMM Match : adh_short (HMM E-Value=1.2e-05)
Length = 201
Score = 46.8 bits (106), Expect = 2e-05
Identities = 35/111 (31%), Positives = 61/111 (54%), Gaps = 12/111 (10%)
Frame = +1
Query: 184 LGERT--ECSQRIAKQARRYEGQFLKCDVTTD--LESVFNQLIDAHKRVDVLVNNAGI-I 348
+ E+T E + +++ ++ F+KCDVT+ +E+ F + D R+D+L NNAGI +
Sbjct: 37 INEKTGNETLKLLSENYSKHRVLFIKCDVTSQPQMEAAFQRTKDVFGRLDILCNNAGIAV 96
Query: 349 CESSLRKT------LEINTVAPIEWTVKFREYMRTDKG-GCGGTICNVSSM 480
E+ L ++ ++IN I T+ ++M G GGTI NV+S+
Sbjct: 97 RENDLLRSGAWKTIIDINVKGVILGTLLGLDHMGVSGAKGHGGTIVNVASL 147
Score = 43.2 bits (97), Expect = 3e-04
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +2
Query: 74 ELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKHGATKVSFL 253
+++ + +TGG +GIGL+I+ L V +LDIN + G +K L + +V F+
Sbjct: 2 KIEGTVAIVTGGVQGIGLAISKALLDRDGKVCMLDINEKTGNETLKLLSENYSKHRVLFI 61
>SB_14553| Best HMM Match : adh_short (HMM E-Value=4.2e-08)
Length = 319
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/59 (40%), Positives = 33/59 (55%)
Frame = +2
Query: 68 ERELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKHGATKV 244
E L K V ITG GIG A GA V+I NL++G AV+++QS+ G+ +V
Sbjct: 32 EARLDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNTAVRDIQSRSGSQQV 90
>SB_5928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 609
Score = 44.8 bits (101), Expect = 1e-04
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +1
Query: 247 FLKCDVTTD--LESVFNQLIDAHKRVDVLVNNAGIICESSLRKTLEINTVAPIEWTVKFR 420
F+ CDV+ L+ F + + H +D++ NNAGI+ E KTL++N + IE
Sbjct: 52 FISCDVSNQDQLKDAFWETVSTHGHLDIVFNNAGILDEERWSKTLDVNLLNSIEPRYNEH 111
Query: 421 EYMRTD 438
Y R +
Sbjct: 112 HYNRRE 117
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/31 (38%), Positives = 21/31 (67%)
Frame = +2
Query: 164 VVILDINLEKGQNAVKELQSKHGATKVSFLN 256
VV++D+ + G + LQ+KHG+ VSF++
Sbjct: 24 VVLVDLQKKAGNDVTCLLQNKHGSGSVSFIS 54
>SB_52724| Best HMM Match : adh_short (HMM E-Value=5.1e-08)
Length = 316
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = +2
Query: 68 ERELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKHGATKV 244
E L K V ITG GIG A GA V+I NL++G AV+++Q+ G+ +V
Sbjct: 32 EARLDGKTVIITGATTGIGKETAVDLAKRGARVIIGARNLDRGNAAVRDIQASSGSQQV 90
>SB_33638| Best HMM Match : adh_short (HMM E-Value=0.0014)
Length = 268
Score = 42.7 bits (96), Expect = 4e-04
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 38 KLIKSATLNMERELKNKIVAITGGAEGIGLSIADQFLSEGAVVVI-LDINLEKGQNAVKE 214
K + M + L N+ +TGG GIGL+I+ + G +++ + N E+ + A E
Sbjct: 66 KAFSYVCIEMSKALSNRYALVTGGTRGIGLAISHKLAKNGYYLILGYNANDERAEKAKSE 125
Query: 215 LQSKH 229
L+SK+
Sbjct: 126 LESKY 130
>SB_15764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 42.7 bits (96), Expect = 4e-04
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +2
Query: 50 SATLNMERELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKH 229
S T ++ LKNK+V ++ A+GIG + A EGA V+ DIN EK +KEL S
Sbjct: 5 SDTKSLGDRLKNKVVVLSAAAQGIGKATALACAREGAKVIATDINAEK----LKELHSVP 60
Query: 230 G 232
G
Sbjct: 61 G 61
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 513 YKASKFALFGFSTTLGHKQNYDRTGVRIVTVCPG 614
Y SK A+ GF+ + +Y G+R+ VCPG
Sbjct: 157 YGTSKAAVIGFTKAIA--ADYITKGIRVNAVCPG 188
>SB_32677| Best HMM Match : SapB_1 (HMM E-Value=4.1)
Length = 256
Score = 42.3 bits (95), Expect = 5e-04
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Frame = +1
Query: 244 QFLKCDVTT--DLESVFNQLIDAHKRVDVLVNNAGIICESSLRKTLEIN 384
+F++CDV L Q + H ++D+L NNAGII E + K++E+N
Sbjct: 93 EFIECDVCNREKLSEAIRQTVKDHSKLDILCNNAGIIDEKNWPKSVELN 141
>SB_11966| Best HMM Match : adh_short (HMM E-Value=4.1e-32)
Length = 728
Score = 41.1 bits (92), Expect = 0.001
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 13/100 (13%)
Frame = +1
Query: 238 EGQFLKCDVTT--DLESVFNQLIDAHKRVDVLVNNAGII-------C-ESSLRKTLEINT 387
E + +CDV ++E V N + D V +L+NNAG++ C ES + +T ++N+
Sbjct: 85 ETHYFECDVRKKDEVEKVANAVEDQAGNVTILINNAGVVTGKKFLNCSESDVMRTFQVNS 144
Query: 388 VAPIEWTV-KFREYMRTDKGGCGGTICNVSSMYGY--CLD 498
+A I WT+ +F M G +I +V+ +G C+D
Sbjct: 145 LAHI-WTIQRFIPSMMEKNRGHIVSIASVAGYFGLVGCVD 183
Score = 35.9 bits (79), Expect = 0.045
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +2
Query: 71 RELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQ 220
+ L+ + V ITG A GIG A +G +V+ DINLE + +E+Q
Sbjct: 31 KSLRGETVLITGAASGIGRLTALILAKKGCKLVLWDINLEALKAVAQEIQ 80
Score = 32.3 bits (70), Expect = 0.55
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 513 YKASKFALFGFSTTLGHK-QNYDRTGVRIVTVCPGFTSSAMTA 638
Y ASKFA G L + + G+ T+CP FT++ M A
Sbjct: 184 YCASKFAAVGLIEALRREIHGLGKMGIEFTTICPHFTATGMFA 226
>SB_8926| Best HMM Match : adh_short (HMM E-Value=1.5e-15)
Length = 537
Score = 39.9 bits (89), Expect = 0.003
Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Frame = +2
Query: 77 LKNKIVA-ITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQS 223
L K+VA I GGA GIG + A + + GA VI+D+ +GQN +E S
Sbjct: 285 LLEKVVALIAGGASGIGRATAIRLIRAGARAVIVDLPSSEGQNTAQEFGS 334
>SB_39237| Best HMM Match : adh_short (HMM E-Value=1.6e-11)
Length = 305
Score = 37.9 bits (84), Expect = 0.011
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +2
Query: 83 NKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQS 223
++IV ITG GIG +A +F GA +V +DIN + V+ ++S
Sbjct: 53 DEIVLITGAGSGIGKGMAIEFAKIGAKIVCVDINKQANDQTVEVIKS 99
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 498 PVFAYYKASKFALFGFSTTLGHK-QNYDRTGVRIVTVCPGFTSSAM 632
P Y +SKF GF +L + + +TGV+ VCP + ++ M
Sbjct: 211 PGMCDYCSSKFGAVGFDESLRMELSSLGKTGVKTTVVCPYYINTGM 256
>SB_6722| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 320
Score = 35.9 bits (79), Expect = 0.045
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 53 ATLNMERELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKHG 232
A + + +LK K V ITG GIG+ +A A V++ ++ KG A E+ G
Sbjct: 62 ANCSSDEKLKGKTVIITGANSGIGMEVARDLAWRKARVIMACRDVHKGMKAAAEIVQSAG 121
>SB_32367| Best HMM Match : adh_short (HMM E-Value=1.7e-07)
Length = 384
Score = 35.9 bits (79), Expect = 0.045
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +2
Query: 86 KIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQ 220
K+ +TGG GIG +IA + LS G+ VVI + K Q A +L+
Sbjct: 17 KVAIVTGGGTGIGKAIAAELLSLGSKVVIASRSEGKLQKAAVDLE 61
>SB_16518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 35.5 bits (78), Expect = 0.059
Identities = 17/62 (27%), Positives = 32/62 (51%)
Frame = +2
Query: 68 ERELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKHGATKVS 247
+ L ++V +TG + GIGL+ A + GA VV+ ++EK A ++ + K+
Sbjct: 88 DENLDGRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEKAHKAELHIKKTNKDCKLE 147
Query: 248 FL 253
+
Sbjct: 148 VM 149
>SB_19040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 35.1 bits (77), Expect = 0.078
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 68 ERELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNA 205
+ L ++V +TG + GIGL+ A + GA VV+ ++EK A
Sbjct: 40 DENLDGRVVMVTGASSGIGLATASALAAHGAHVVMACRDMEKAHKA 85
>SB_26063| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 35.1 bits (77), Expect = 0.078
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 13/104 (12%)
Frame = +1
Query: 214 IAKQARRYEGQFL---KCDVTTD--LESVFNQLIDAHKRVDVLVNNAGI----ICE---- 354
+ + ARR G L + DVT+D + V + A +R+DVLVNNAG+ + E
Sbjct: 239 LEEAARRQLGDTLIVKQLDVTSDESVTEVLQSIYSAERRIDVLVNNAGVGLIGVLETHTM 298
Query: 355 SSLRKTLEINTVAPIEWTVKFREYMRTDKGGCGGTICNVSSMYG 486
S +R+ +N + T + + KG G I N+ S+ G
Sbjct: 299 SLVREMFNVNFFGVVRLT---KAVIPKMKGNPSGHIINIPSIGG 339
>SB_7777| Best HMM Match : adh_short (HMM E-Value=0.083)
Length = 133
Score = 34.3 bits (75), Expect = 0.14
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Frame = +1
Query: 256 CDVTTDLESVFNQLIDAHKRVDVLVNNAGI-ICES-------SLRKTLEINTVAPIEWTV 411
CD D+E + +LI++ + D+LVNNAG I ES S + E N AP+
Sbjct: 8 CDDVADIEKM-QKLIESQETFDLLVNNAGFAIFESFLEIKPESFDRMHETNVRAPLFIAQ 66
Query: 412 KFREYMRTDKGGCGGTICNVSSMY 483
+ M G GG I NVSS++
Sbjct: 67 AVAKKMVAK--GEGGAIVNVSSVF 88
>SB_26576| Best HMM Match : LMWPc (HMM E-Value=5.60519e-45)
Length = 620
Score = 33.9 bits (74), Expect = 0.18
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 77 LKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKHGATK 241
L+ ++ +TGG GIG ++ + + GA V ++D++ + + L + + T+
Sbjct: 191 LRGRLALVTGGGSGIGRAVCEALANRGASVSVIDLHGVGAKETSENLATHNDTTR 245
>SB_39030| Best HMM Match : adh_short (HMM E-Value=5.5e-34)
Length = 527
Score = 33.5 bits (73), Expect = 0.24
Identities = 26/92 (28%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Frame = +1
Query: 259 DVTTD--LESVFNQLIDAHKRVDVLVNNAGII--------CESSLRKTLEINTVAPIEWT 408
DV++D +E N + + R+D+LVNNAGI +S +++T N + +
Sbjct: 64 DVSSDDSVEEALNAIYEEEGRIDILVNNAGISHIGMLETQTQSLVKETFNTNFFGVLRMS 123
Query: 409 VKFREYMRTDKGGCGGTICNVSSMYGYCLDPY 504
M++D G I N+SS G+ P+
Sbjct: 124 KAVIPRMKSDH---SGHIINISSTAGHTGMPF 152
>SB_9401| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 33.1 bits (72), Expect = 0.32
Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Frame = +1
Query: 259 DVTTD--LESVFNQLIDAHKRVDVLVNNAGI--IC------ESSLRKTLEINTVAPIEWT 408
DV +D +++V ++++ R+DVLVNNAGI C ++ K E N + T
Sbjct: 95 DVCSDESVKAVVAEIVEKEGRIDVLVNNAGIGLFCVPECATTDAINKVFEPNVYGLMRMT 154
Query: 409 VKFREYMRTDKGGCGGTICNVSSMYGYCLDPYLRI 513
+M+ + G + N+ S+ G P+ I
Sbjct: 155 NAVIPHMKKQR---AGHVVNIGSVLGIVGTPFSEI 186
>SB_47084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 355
Score = 32.7 bits (71), Expect = 0.42
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 77 LKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSK 226
L K V +TG GIG + A + GA V++ +LE + A E++ K
Sbjct: 66 LHGKTVIVTGANSGIGKATALELARRGARVIMACRDLESAEKAASEIRYK 115
>SB_23903| Best HMM Match : adh_short (HMM E-Value=7.3e-34)
Length = 253
Score = 31.9 bits (69), Expect = 0.73
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Frame = +1
Query: 298 IDAH-KRVDVLVNNAGIICESSLR-KTLEINTVAPIEWTVKFREY---------MRTDKG 444
+D H R+DVLVNNAGI+ E+ +R + +E+ + T F + M T +G
Sbjct: 79 LDQHFGRLDVLVNNAGIL-ETQMRLEQMELARWQRVFATNVFGSFLCCREAIKRMSTRQG 137
Query: 445 GCGGTICNVSS 477
G GG I N+SS
Sbjct: 138 GNGGAIVNLSS 148
>SB_44869| Best HMM Match : adh_short (HMM E-Value=5.4e-23)
Length = 228
Score = 31.9 bits (69), Expect = 0.73
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2
Query: 86 KIVAITGGAEGIGLSIADQFLSEGAVVV 169
KIVAITG + G+GL++ F S+G VV
Sbjct: 3 KIVAITGVSTGLGLALTKWFSSQGHTVV 30
>SB_1018| Best HMM Match : adh_short (HMM E-Value=2.1e-33)
Length = 717
Score = 31.5 bits (68), Expect = 0.96
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 277 ESVFNQLIDAHKRVDVLVNNAGIICESSLRKTLEIN 384
+ V I A R+DV+VNNAGI+ + S+ + E++
Sbjct: 81 DQVVETAIKAFGRIDVVVNNAGILRDKSILRMSELD 116
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 86 KIVAITGGAEGIGLSIADQFLSEGAVVVILDI 181
++V +TG G+G A F GA VV+ D+
Sbjct: 11 RVVLVTGAGNGLGRQYALAFAERGASVVVNDL 42
>SB_7201| Best HMM Match : ketoacyl-synt (HMM E-Value=0)
Length = 1821
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 80 KNKIVAITGGAEGIGLSIADQFLSEGAVVVIL---DINLEKGQNAVKELQSKHGATKV 244
+++ + GG G G +A F GA V+L E+ + V+E++ + GA +
Sbjct: 1613 RDRTYMVAGGVRGFGFQLAQSFAENGAKTVVLLARSPPSEEKKKVVQEIERRTGARMI 1670
>SB_3125| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 30.3 bits (65), Expect = 2.2
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = +2
Query: 74 ELKNKIVAITGGAEGIGLSIADQFLSEGAVVVI 172
+L K V ITG + GIG +IA + +GA VVI
Sbjct: 2 KLAGKTVFITGASRGIGKAIAVKVARDGANVVI 34
>SB_8042| Best HMM Match : DUF803 (HMM E-Value=0)
Length = 603
Score = 29.9 bits (64), Expect = 2.9
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 471 IIDVRLLSRPVFAYYKASKFALFGFSTTLGHKQNYDRTGVRIVTVCPGFTSS 626
++D+ + P A Y +KF + S G +Q +GV++ T+ PG +S
Sbjct: 208 MVDINCKAFPGLAIYSGTKFFVEALSQ--GLRQEIAGSGVKVTTIQPGIATS 257
Score = 28.3 bits (60), Expect = 9.0
Identities = 16/59 (27%), Positives = 31/59 (52%)
Frame = +2
Query: 71 RELKNKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKHGATKVS 247
R L+ ++ +TG + GIG ++A + L+E V V L E+ +++ +G +S
Sbjct: 100 RPLEGQVAIVTGASSGIGAAVA-KALAEAGVKVALAARREERLTQLRDEIIANGDVAIS 157
>SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33)
Length = 321
Score = 29.5 bits (63), Expect = 3.9
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -3
Query: 792 GSPPYNSPGCPLSGTXNSSATPVXTCAGSWPLQLAPSEPQTLQRAHPTPS 643
G P +P C + SS P TC G P QLA S Q H P+
Sbjct: 170 GMPSQCAPSCMAASPCPSSCQP--TCCGMNPSQLAQSVVPAPQYVHVPPA 217
>SB_30795| Best HMM Match : Epimerase (HMM E-Value=0)
Length = 869
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +2
Query: 83 NKIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVKELQSKHGATKVSFLNAM 262
+K V +TGGA IG + L+ G VVI+D V+ ++ G F+ +
Sbjct: 38 SKKVLVTGGAGYIGSHCVVEILNAGYEVVIIDNLSNSDAECVRRVEEISGKKVPFFIEDL 97
Query: 263 L 265
L
Sbjct: 98 L 98
>SB_24663| Best HMM Match : Exo_endo_phos (HMM E-Value=6.7e-05)
Length = 666
Score = 28.7 bits (61), Expect = 6.8
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = -1
Query: 437 SVLMYSLNFTVHSMGATVLISRVFLNELSHMIP 339
SV++YS N T H+ G +++++ ++N L P
Sbjct: 46 SVILYSGNDTTHTNGVALIVAKKYVNTLLEWEP 78
>SB_7548| Best HMM Match : LRR_1 (HMM E-Value=8.7e-14)
Length = 384
Score = 28.7 bits (61), Expect = 6.8
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 408 RPLDGSHSVDFKSLPQ*TLAYDPGVVHQDVNTFVSIYELIEYRFQIGRNIAFKKLTFV 235
R LD S S+ ++ Q + DPG +H+ +S+Y + Y N AF +T V
Sbjct: 21 RELDLSRSLTYEKYQQHMKSDDPGALHEFPQDLLSVYSVSFYE---KLNFAFNCITAV 75
>SB_916| Best HMM Match : GatB_Yqey (HMM E-Value=9.5)
Length = 238
Score = 28.7 bits (61), Expect = 6.8
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Frame = +1
Query: 235 YEGQFLKCDVTTDLE-SVFNQLIDAHKRVDVLVNNAGIICESSLRKTLEINTVAPIEWTV 411
+E Q D TDLE SV NQ R+ +L+N AG +C+++ + L I I T+
Sbjct: 42 HELQARAADRQTDLEMSVRNQA-----RIILLINEAGNLCKAATFRRLAI----LISQTL 92
Query: 412 KFREYMR-TDKGGCGGTICNVSSMYG-YCL 495
F ++ R T KG N S ++ +CL
Sbjct: 93 FFLQFTRVTGKGIVSLLFSNRSDLFSKHCL 122
>SB_20705| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 976
Score = 28.7 bits (61), Expect = 6.8
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +2
Query: 86 KIVAITGGAEGIGLSIADQFLSEGAVVVILDINLEKGQNAVK 211
K+V ITG + GIG +A +F G+ +V L EK VK
Sbjct: 871 KVVWITGASSGIGEHLAYEFTKHGSKLV-LSARREKRLEQVK 911
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 28.3 bits (60), Expect = 9.0
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 9/65 (13%)
Frame = +1
Query: 316 VDVLVNNAGII--------CESSLRKTLEINTVAPIEWTVK-FREYMRTDKGGCGGTICN 468
VD+LVNNAGI+ ++ ++K +E+N +A WT + F M G TI +
Sbjct: 1300 VDILVNNAGILHGKRLLDQTDAQIQKAIELNLLAHF-WTSRSFLGRMLEQNQGHIVTISS 1358
Query: 469 VSSMY 483
VS +
Sbjct: 1359 VSGSF 1363
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,012,208
Number of Sequences: 59808
Number of extensions: 535773
Number of successful extensions: 1405
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2597949818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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