Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0643
(856 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56| Best HMM Match : Actin (HMM E-Value=0) 245 3e-65
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 245 3e-65
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 244 5e-65
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 242 2e-64
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 189 2e-56
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 197 1e-50
SB_54| Best HMM Match : Actin (HMM E-Value=0) 170 1e-42
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 138 7e-33
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 136 2e-32
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 134 9e-32
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 84 1e-16
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 59 4e-09
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 50 2e-06
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 49 4e-06
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 49 6e-06
SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07) 45 9e-05
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 42 6e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 35 0.073
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.073
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.097
SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19) 34 0.13
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024) 33 0.30
SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.30
SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45) 32 0.68
SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.90
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.90
SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6) 31 0.90
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.90
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.2
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.2
SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.6
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 31 1.6
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.6
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 2.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84) 30 2.1
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 2.1
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 2.1
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 2.1
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 2.1
SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4) 30 2.8
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4) 29 3.6
SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7) 29 3.6
SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54) 29 3.6
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 4.8
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.8
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.8
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 29 6.4
SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_6983| Best HMM Match : rve (HMM E-Value=0.011) 29 6.4
SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2) 29 6.4
SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59) 28 8.4
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 28 8.4
SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21) 28 8.4
SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 245 bits (600), Expect = 3e-65
Identities = 127/200 (63%), Positives = 136/200 (68%)
Frame = +3
Query: 252 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 431
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 432 GVSHTVPIYEGYALPHAILRLXLXXXXXXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKLC 611
GV+HTVPIYEGYALPHAILRL L + RDIKEKLC
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 217
Query: 612 YVALDFEQEMGNAAFQQFPSRSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCMEAFGIHET 791
YVALDFEQEM AA +S +PDG VI + P L ME+ GIHET
Sbjct: 218 YVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 277
Query: 792 TXNSIMXCEVXFVKDLYATT 851
T NSIM C+V KDLYA T
Sbjct: 278 TYNSIMKCDVDIRKDLYANT 297
Score = 189 bits (461), Expect = 2e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 183
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 15 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
Query: 184 IVTNWDDMEKIWHHTFYNELRVAP 255
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 75 IVTNWDDMEKIWHHTFYNELRVAP 98
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 245 bits (600), Expect = 3e-65
Identities = 127/200 (63%), Positives = 136/200 (68%)
Frame = +3
Query: 252 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 431
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 432 GVSHTVPIYEGYALPHAILRLXLXXXXXXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKLC 611
GV+HTVPIYEGYALPHAILRL L + RDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 612 YVALDFEQEMGNAAFQQFPSRSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCMEAFGIHET 791
YVALDFEQEM AA +S +PDG VI + P L ME+ GIHET
Sbjct: 219 YVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 792 TXNSIMXCEVXFVKDLYATT 851
T NSIM C+V KDLYA T
Sbjct: 279 TYNSIMKCDVDIRKDLYANT 298
Score = 189 bits (461), Expect = 2e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 183
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 184 IVTNWDDMEKIWHHTFYNELRVAP 255
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAP 99
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 244 bits (598), Expect = 5e-65
Identities = 126/200 (63%), Positives = 136/200 (68%)
Frame = +3
Query: 252 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 431
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 432 GVSHTVPIYEGYALPHAILRLXLXXXXXXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKLC 611
GV+HTVPIYEGYALPHAI+RL L + RDIKEKLC
Sbjct: 159 GVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLC 218
Query: 612 YVALDFEQEMGNAAFQQFPSRSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCMEAFGIHET 791
YVALDFEQEM AA +S +PDG VI + P L ME+ GIHET
Sbjct: 219 YVALDFEQEMETAASSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 278
Query: 792 TXNSIMXCEVXFVKDLYATT 851
T NSIM C+V KDLYA T
Sbjct: 279 TYNSIMKCDVDIRKDLYANT 298
Score = 189 bits (461), Expect = 2e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 183
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 184 IVTNWDDMEKIWHHTFYNELRVAP 255
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAP 99
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 242 bits (593), Expect = 2e-64
Identities = 126/200 (63%), Positives = 135/200 (67%)
Frame = +3
Query: 252 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 431
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 98 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 157
Query: 432 GVSHTVPIYEGYALPHAILRLXLXXXXXXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKLC 611
GV+HTVPIYEGYALPHAILRL L + RDIKEKL
Sbjct: 158 GVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLA 217
Query: 612 YVALDFEQEMGNAAFQQFPSRSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCMEAFGIHET 791
YVALDFEQEM AA +S +PDG VI + P L ME+ GIHET
Sbjct: 218 YVALDFEQEMATAAASSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHET 277
Query: 792 TXNSIMXCEVXFVKDLYATT 851
T NSIM C+V KDLYA T
Sbjct: 278 TYNSIMKCDVDIRKDLYANT 297
Score = 189 bits (461), Expect = 2e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 183
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 15 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
Query: 184 IVTNWDDMEKIWHHTFYNELRVAP 255
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 75 IVTNWDDMEKIWHHTFYNELRVAP 98
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 189 bits (461), Expect = 2e-48
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 183
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 16 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 75
Query: 184 IVTNWDDMEKIWHHTFYNELRVAP 255
IVTNWDDMEKIWHHTFYNELRVAP
Sbjct: 76 IVTNWDDMEKIWHHTFYNELRVAP 99
Score = 146 bits (354), Expect(2) = 2e-56
Identities = 70/75 (93%), Positives = 73/75 (97%), Gaps = 2/75 (2%)
Frame = +3
Query: 252 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 431
PEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGD
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGD 158
Query: 432 GVSHTVPIYE--GYA 470
GVSHTVPIYE GY+
Sbjct: 159 GVSHTVPIYEERGYS 173
Score = 91.9 bits (218), Expect(2) = 2e-56
Identities = 48/88 (54%), Positives = 53/88 (60%)
Frame = +3
Query: 588 RDIKEKLCYVALDFEQEMGNAAFQQFPSRSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCM 767
RDIKEKLCYVALDFEQEM AA +S +PDG VI + P L M
Sbjct: 184 RDIKEKLCYVALDFEQEMQTAASSSSIEKSYELPDGQVITIGNERFRCPEALLQPSFLGM 243
Query: 768 EAFGIHETTXNSIMXCEVXFVKDLYATT 851
E+ GIHETT NSIM C+V KDLYA T
Sbjct: 244 ESSGIHETTYNSIMKCDVDIRKDLYANT 271
Score = 33.5 bits (73), Expect = 0.22
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 497 LSRSDLTDYLMKILTERGYSFTTNSEREIV 586
+ D + + I ERGYSFTT +EREIV
Sbjct: 154 MDSGDGVSHTVPIYEERGYSFTTTAEREIV 183
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 197 bits (480), Expect = 1e-50
Identities = 104/183 (56%), Positives = 116/183 (63%)
Frame = +3
Query: 303 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 482
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGYALPHA
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 137
Query: 483 ILRLXLXXXXXXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKLCYVALDFEQEMGNAAFQQ 662
I+RL L + RDIKEKLCYVALDFEQEM AA
Sbjct: 138 IIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSS 197
Query: 663 FPSRSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCMEAFGIHETTXNSIMXCEVXFVKDLY 842
+S +PDG VI + P L ME+ GIHETT NSIM C+V KDLY
Sbjct: 198 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLY 257
Query: 843 ATT 851
A T
Sbjct: 258 ANT 260
Score = 161 bits (390), Expect = 9e-40
Identities = 73/76 (96%), Positives = 73/76 (96%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 183
GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG
Sbjct: 15 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHG 74
Query: 184 IVTNWDDMEKIWHHTF 231
IVTNWDDMEKI TF
Sbjct: 75 IVTNWDDMEKIMFETF 90
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 170 bits (413), Expect = 1e-42
Identities = 86/198 (43%), Positives = 111/198 (56%)
Frame = +3
Query: 249 RPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSG 428
R E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LYASGRTTG V D G
Sbjct: 2142 RGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALYASGRTTGTVFDCG 2201
Query: 429 DGVSHTVPIYEGYALPHAILRLXLXXXXXXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKL 608
DGVSHTVP+Y+GY LPHA R+ L + RD+KE L
Sbjct: 2202 DGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKETL 2261
Query: 609 CYVALDFEQEMGNAAFQQFPSRSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCMEAFGIHE 788
CY A+D+E+E+ A +PDG I + +L + GIHE
Sbjct: 2262 CYCAMDYERELKEAETSDDCEAPYMLPDGQSIRIGSERFRAAEPLFQPSLLGRDIDGIHE 2321
Query: 789 TTXNSIMXCEVXFVKDLY 842
+ SI C++ +L+
Sbjct: 2322 SIFKSIKKCDIDLRAELF 2339
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRPRHQ 84
G CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2104 GFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 138 bits (333), Expect = 7e-33
Identities = 58/83 (69%), Positives = 75/83 (90%)
Frame = +3
Query: 243 ACRPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 422
A R +HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD
Sbjct: 121 AVRQVQHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLD 180
Query: 423 SGDGVSHTVPIYEGYALPHAILR 491
+GDGVSH+VPIYEG+A+PH+I+R
Sbjct: 181 AGDGVSHSVPIYEGFAMPHSIMR 203
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 136 bits (330), Expect = 2e-32
Identities = 72/197 (36%), Positives = 99/197 (50%)
Frame = +3
Query: 252 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 431
P VLLTE PLNP NREKM ++MFE + +Y+AIQAVL+LYA G TG+V+DSGD
Sbjct: 102 PRNTKVLLTEPPLNPMKNREKMIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGD 161
Query: 432 GVSHTVPIYEGYALPHAILRLXLXXXXXXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKLC 611
GV+H P+YEG+ALPH RL + ++ R +KEKLC
Sbjct: 162 GVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKEKLC 221
Query: 612 YVALDFEQEMGNAAFQQFPSRSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCMEAFGIHET 791
YV + EQE A +PDG V+ + P ++ +E G+ E
Sbjct: 222 YVGYNIEQEQKLALETTVLVEQYTLPDGRVVKLSGERFEAPEALFQPHLINVEGVGVAEL 281
Query: 792 TXNSIMXCEVXFVKDLY 842
N+I ++ + Y
Sbjct: 282 LFNTIQAADIDTRSEFY 298
Score = 85.0 bits (201), Expect = 7e-17
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIE 177
G K G+AG + P +FPS+VGRP R + + KD VGDEA R +L + YP++
Sbjct: 16 GFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRYMLEVNYPMD 75
Query: 178 HGIVTNWDDMEKIWHHTF-YNELRVAPRNTQ 267
+GIV NWDDM+ +W +TF +++ + PRNT+
Sbjct: 76 NGIVRNWDDMKHVWDYTFGESKMNIDPRNTK 106
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 134 bits (324), Expect = 9e-32
Identities = 68/106 (64%), Positives = 73/106 (68%)
Frame = +3
Query: 324 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLXLX 503
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V DSGDGVSH VPIYEGYALPHAILRL L
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFDSGDGVSHNVPIYEGYALPHAILRLDLA 60
Query: 504 XXXXXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKLCYVALDFEQEM 641
+ RDIKEKLCYVALDF QE+
Sbjct: 61 GRDLTDYLMKLMTERGYSFTTTAEREIVRDIKEKLCYVALDFYQEI 106
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 84.2 bits (199), Expect = 1e-16
Identities = 35/80 (43%), Positives = 57/80 (71%)
Frame = +3
Query: 261 HPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVS 440
HP+L++EA N + REK+T++MFE +N PA ++ +VL+ +A+GR+ G+V+DSG +
Sbjct: 34 HPLLMSEAAWNTRIKREKLTELMFEKYNVPAFFLCKNSVLTAFANGRSNGLVIDSGATQT 93
Query: 441 HTVPIYEGYALPHAILRLXL 500
VP+++GY L AI+R L
Sbjct: 94 SAVPVHDGYVLQQAIVRSPL 113
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 59.3 bits (137), Expect = 4e-09
Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 1/113 (0%)
Frame = +3
Query: 369 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLXLXXXXXXXXXXXXXXXX 548
Q LSLYASG T G+ L SG + IYEG+ L H + L +
Sbjct: 767 QLSLSLYASGMTLGVCLSSGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQ 826
Query: 549 XXXXLPIPSG-KSFRDIKEKLCYVALDFEQEMGNAAFQQFPSRSLRIPDGXVI 704
SG + DIKEK+CY++ D +E+ N + ++ +PDG +I
Sbjct: 827 RGHNFTSSSGWQIVNDIKEKICYLSKDHLKEVHNYKTNEGLTKFYTLPDGQMI 879
Score = 44.0 bits (99), Expect = 2e-04
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Frame = +1
Query: 4 GMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYVGDEAQSKRGILTL 162
G+ K GFAGD PR + P++VG P+ +++G + KD GD A +K G++ L
Sbjct: 710 GISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKYGDAAVAKSGVMHL 765
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +1
Query: 7 MCKAGFAGDDAPRAVFPSIVGRPRHQ 84
M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1367 MWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 49.2 bits (112), Expect = 4e-06
Identities = 22/55 (40%), Positives = 30/55 (54%)
Frame = +1
Query: 97 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPRN 261
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR P +
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPED 331
Score = 32.3 bits (70), Expect = 0.52
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 405 TGIVLDSGDGVSHTVPI 455
TG V+DSGDGV+H +P+
Sbjct: 356 TGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 48.8 bits (111), Expect = 6e-06
Identities = 31/117 (26%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +3
Query: 336 TFNTPAMYVAIQAVLSLYASGRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLXLXXXX 512
++ T A+ + S RT TG V+DSGDGV+H +P+ EGY + I + +
Sbjct: 38 SYATKAVLALAASWTSRQVGERTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRD 97
Query: 513 XXXXXXXXXXXXXXXXLPIPSGKSFRDIKEKLCYVALDFEQEMGNAAFQQFPSRSLR 683
P S ++ + IKE+ Y+ D +E A ++Q P++ ++
Sbjct: 98 ITFFVQQLLREREMGIPPEQSMETAKTIKERWGYICPDIAKEF--AKYEQEPAKWIK 152
>SB_13344| Best HMM Match : Actin (HMM E-Value=1.5e-07)
Length = 149
Score = 44.8 bits (101), Expect = 9e-05
Identities = 23/58 (39%), Positives = 29/58 (50%)
Frame = +3
Query: 672 RSLRIPDGXVIHYRKRKXPLPXXXXXNLVLCMEAFGIHETTXNSIMXCEVXFVKDLYA 845
++ +PDG VI + P L MEA GIHE N IM C+V KDLY+
Sbjct: 12 KTYELPDGQVISIGNERFRCPEAMFQPAFLGMEAPGIHEAIYNCIMKCDVDIRKDLYS 69
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +1
Query: 655 SSSSLREVYEFPTVXSFTIGNERXRCPXALFQTSF 759
+S L + YE P +IGNER RCP A+FQ +F
Sbjct: 6 NSPILEKTYELPDGQVISIGNERFRCPEAMFQPAF 40
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 41.9 bits (94), Expect = 6e-04
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +1
Query: 4 GMC--KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKY--P 171
G C K GFA + APR++ P+ + + + + ++ ++GD+ + + L Y P
Sbjct: 241 GACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKDYSALFYVLP 292
Query: 172 IEHGIVTNWDDMEKIWHHTFYNE 240
+ G + NWD ++IW +TF E
Sbjct: 293 FQKGFLVNWDVEKQIWDYTFGKE 315
Score = 34.7 bits (76), Expect = 0.097
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Frame = +3
Query: 309 EKMTQIMFETFNTPAMYVAIQAVLSLY------ASGRTTGIVLDSGDGVSHTVPIYEGYA 470
+ M +I+FE +N A+ A LS Y S +V+D+G +H VP++ G
Sbjct: 319 DAMDEILFEEYNFKALSRTTAAQLSAYKCHQDMVSKNPVCLVVDTGYSFTHIVPVFNGKV 378
Query: 471 LPHAILR 491
+ A+ R
Sbjct: 379 IKKAVRR 385
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 35.1 bits (77), Expect = 0.073
Identities = 15/55 (27%), Positives = 31/55 (56%)
Frame = +3
Query: 252 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 416
P +H V++T +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 525 PVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 579
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 35.1 bits (77), Expect = 0.073
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +1
Query: 349 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
PP P P + TRP VP +T PTP P T P P+
Sbjct: 919 PPPLPPPPPPIQTTRPTVPTTPTTQASTTRPTPPPPTSALPPPIPA 964
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +1
Query: 328 CSKHSTRPPCTSPSKPCSRCTRPVVPPVSCW--TPATVSPTPCPSTKDTHSPTPSC 489
CS+HS +P C PSK C + V+PP + T ++ P C ++ P C
Sbjct: 1521 CSEHSCKPEC--PSKCCMK----VLPPTTLGQNTANSLCPVYCLTSCKPDCPIKCC 1570
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.097
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -2
Query: 81 MAGPSHDRGEHGARSIISCETGLAHT 4
MA + D GE+G+ SI+S ETGLAHT
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHT 26
>SB_29576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1202
Score = 34.3 bits (75), Expect = 0.13
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 349 PPCTSP-SKPCSRCTRPVVPPVSCWTPATVSPTP-CPSTKDTHSPTPS 486
P TSP + P +R P+ PP C + V PTP S+K + SP+PS
Sbjct: 316 PAFTSPPNTPTTRTFSPISPPAGC-AASPVPPTPPAISSKRSFSPSPS 362
>SB_39781| Best HMM Match : cNMP_binding (HMM E-Value=2.2e-19)
Length = 1211
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 337 HSTRP-PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 450
H+T P P T PS P C + P C+T T+SP PC
Sbjct: 665 HTTHPSPATHPS-PSQPCPATHLSPKPCFTFVTLSPKPC 702
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 352 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC 450
PC SPS P + P C+T T+SP PC
Sbjct: 510 PCFSPSNPSPASH---LSPKPCFTSLTLSPKPC 539
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 33.5 bits (73), Expect = 0.22
Identities = 23/52 (44%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 337 HSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 486
HST ++PS P + CT P P P + TP+T S PST T S TPS
Sbjct: 63 HSTPSAPSTPSTPSTPCT-PSTPSTPSTPSTPSTPSTPSAPSTPSTPS-TPS 112
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/56 (42%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +1
Query: 328 CSKHSTRPPCT--SPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTPS 486
C+ + P T +PS P + CT P + TP+T S TPC PST T S TPS
Sbjct: 40 CTPSTPSTPSTPITPSTPSTPCTHST--PSAPSTPSTPS-TPCTPSTPSTPS-TPS 91
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 334 KHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSP--TPS 486
K+ R ++PS PC+ T P P P + TP+T S TPC PST T S TPS
Sbjct: 2 KNPHRLKLSTPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPSTPITPS 55
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +1
Query: 358 TSPSKPCSRCTRPVVP--PVSCWTPATVSPTPC-PSTKDTHSPTP 483
++PS PC+ T P P P + TP+T S TPC PST T S TP
Sbjct: 375 STPSTPCTPST-PSTPSTPSTPRTPSTPS-TPCTPSTPSTPS-TP 416
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/54 (38%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +1
Query: 331 SKHSTRPPCTSPSKPCSRCTRPVVP--PVSCWTPATVSPTPCPSTKDTHSPTPS 486
S ST +PS P + CT P P P + TP+T S TPC + + TPS
Sbjct: 22 STPSTPSTPRTPSTPSTPCT-PSTPSTPSTPITPSTPS-TPCTHSTPSAPSTPS 73
Score = 28.3 bits (60), Expect = 8.4
Identities = 23/52 (44%), Positives = 27/52 (51%)
Frame = +1
Query: 331 SKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
S STR ++PS P + T P P TP+T S T PST T S TPS
Sbjct: 644 STPSTRSTPSTPSTPSTPST-PSTPS----TPSTPSLTHTPSTPSTPS-TPS 689
>SB_33205| Best HMM Match : Mucin (HMM E-Value=0.0024)
Length = 286
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/52 (28%), Positives = 22/52 (42%)
Frame = +1
Query: 358 TSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWX*PVGP 513
T+P+ P + T P P + TP T + TP +P P+ P P
Sbjct: 130 TTPTTPTTAPTTPTTPTTAATTPTTAATTPAAGAAAAAAPPPAAAAAAPPPP 181
>SB_23053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 497
Score = 33.1 bits (72), Expect = 0.30
Identities = 24/101 (23%), Positives = 38/101 (37%)
Frame = +2
Query: 293 PQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRT 472
P G + PDH + ++H P L + R+ + G+ +R PH T
Sbjct: 192 PHGVSKRTAPDHPHGV--SKHTA--PDHTLGLSKRTGPDHTHGVSKRTAPHHPLGLSKHT 247
Query: 473 PPRHPASGLSRSDLTDYLMKILTERGYSFTTNSEREIVS*H 595
P HP GLS+ D+ + + G T + H
Sbjct: 248 APDHP-HGLSKHTAPDHTIGLYKRTGPDHTLGVSKRTAPDH 287
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/81 (27%), Positives = 30/81 (37%)
Frame = +2
Query: 281 GSPQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 460
G G + PDH + R P L V R+ + GL +R PH
Sbjct: 320 GPDHTHGVSKRTAPDHPLGLSK----RTAPDHTLGVSKRTAPDHPHGLSKRTAPHHPLGL 375
Query: 461 RIRTPPRHPASGLSRSDLTDY 523
T P HP G+S+ D+
Sbjct: 376 SKSTAPDHP-HGVSKRTAPDH 395
>SB_55640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1071
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Frame = +1
Query: 352 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC-----PSTKDTHSP 477
P T PC + CT+ +P +TP T TPC PST+ +H+P
Sbjct: 844 PSTKRYTPCYERYTPCTKRYIPSAKRYTPCTERYTPCTKRYTPSTEPSHAP 894
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Frame = +1
Query: 328 CSKHSTRPPCTSPSKPCSR----CTRPVVPPVSCWTPATVSPTPC 450
C++ T PCT PC+ CT P +TP+T TPC
Sbjct: 626 CTERYT--PCTERYIPCTERYTPCTERYTPSTERYTPSTERYTPC 668
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 4/37 (10%)
Frame = +1
Query: 352 PCTSPSKPC----SRCTRPVVPPVSCWTPATVSPTPC 450
PCT PC + CT+ P +TP T TPC
Sbjct: 746 PCTERYTPCYERYTPCTKRYTPCTERYTPCTERYTPC 782
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +1
Query: 349 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
P SP+ P P P + TP T +PT TK T + TP+
Sbjct: 56 PTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT 101
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +1
Query: 343 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
T P T+P++ T P + TP +PTP T T +PT S
Sbjct: 42 TTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTS 89
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 349 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT-PCPSTKDTHSPTPS 486
P +P+KP P + TP T SPT P +T +PTP+
Sbjct: 31 PTTHTPTKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPT 77
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/47 (31%), Positives = 19/47 (40%)
Frame = +1
Query: 340 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPT 480
+T P T K + T + P TP PTP T T +PT
Sbjct: 72 ATPTPTTPTPKTPTPTTSTLTKPTPATTPTPTKPTPTAHTPTTPTPT 118
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Frame = +1
Query: 343 TRP-PCTSPS--KPCSRCTRPVVPPVSCWTPATVSP-TPCPS--TKDTHSPT 480
T+P P T+P+ KP P P + TP +P TP P+ T H+PT
Sbjct: 92 TKPTPATTPTPTKPTPTAHTPTTPTPTAHTPTKPTPKTPTPTTPTPTAHTPT 143
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +1
Query: 343 TRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP-TPS 486
T+P T+P+ T P S P +PTP T T +P TP+
Sbjct: 37 TKPSPTTPTSTAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPT 85
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = +1
Query: 340 STRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSP---TPCPSTKDTHSPTPS 486
ST P T+P+ T P + TP +P TP P+T PTP+
Sbjct: 46 STAPTQTTPTPTTPSPTAPTQTTPTPATPTPTTPTPKTPTPTTSTLTKPTPA 97
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 349 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 444
P +P+KP + P P + TP T +PT
Sbjct: 117 PTAHTPTKPTPKTPTPTTPTPTAHTPTTPTPT 148
>SB_34189| Best HMM Match : MAM (HMM E-Value=5.60519e-45)
Length = 649
Score = 31.9 bits (69), Expect = 0.68
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 346 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHS 474
+PP T+PSK T P+ P++ TP T T +TK T S
Sbjct: 383 KPPTTTPSK----ATAPISDPMTTTTPTTTKATTPTTTKATAS 421
>SB_55818| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/59 (30%), Positives = 20/59 (33%)
Frame = +1
Query: 349 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWX*PVGPHRLP 525
PP +P+ P P PP PA P P P P P PH LP
Sbjct: 57 PPAAAPAAPPPPAAAPAAPPPPAAPPAAPPPPP-PLPAPPPPPAQPAPQPPPAPPHFLP 114
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.90
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 300 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 416
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_46336| Best HMM Match : DUF1518 (HMM E-Value=5.6)
Length = 187
Score = 31.5 bits (68), Expect = 0.90
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +1
Query: 364 PSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWX*PVGP 513
PS P S PV V T T +PT C T + P+C+ PV P
Sbjct: 85 PSSPVSPLPSPVPAVAATPSQTYCTSTPTSCTPTTTCYLQVPTCILIPPVNP 136
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.90
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 27 CETGLAHT 4
CET L T
Sbjct: 252 CETQLVPT 259
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 27 CETGLAHT 4
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 27 CETGLAHT 4
CET L T
Sbjct: 130 CETQLVLT 137
>SB_8780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 31.1 bits (67), Expect = 1.2
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = -1
Query: 505 PAKXRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNM 326
P+ + +W P T W +PSP+ T P ++T+W + +S++
Sbjct: 93 PSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSWTSPSPQYKTTSWSSPLPQQTTFLSSL 152
Query: 325 IWVIFSLLALGLR 287
+I L + R
Sbjct: 153 YHIIGRLSGVHYR 165
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/54 (24%), Positives = 21/54 (38%)
Frame = -1
Query: 529 HEVVCEVRPAKXRRRMAWGSAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 368
H+ P+ + +W S P T W P P+ T P ++T+W
Sbjct: 73 HKTTSWTSPSPQYKTTSWTSPSPQYKTTSWSLPLPQHKTTSWSSPSPKYKTTSW 126
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = -1
Query: 472 SAYPS*MGTVWETPSPESSTIPVVRPDAYSESTAW 368
S +P T W +PSP+ T P ++T+W
Sbjct: 68 STFPQHKTTSWTSPSPQYKTTSWTSPSPQYKTTSW 102
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 27 CETGLAHT 4
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 27 CETGLAHT 4
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 27 CETGLAHT 4
CET L T
Sbjct: 288 CETQLVLT 295
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 30.7 bits (66), Expect = 1.6
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 337 HSTRPPCTSP--SKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTKDTHSPTP 483
H+T+PP T P +KP + R PP + P T P T P T H+ P
Sbjct: 137 HTTKPPTTKPQTTKPHTTKPRTTKPPTT--KPHTTKPHTTKPHTTKPHTTKP 186
Score = 30.3 bits (65), Expect = 2.1
Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 3/74 (4%)
Frame = +1
Query: 337 HSTRPPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVWX*PVGP 513
H+ +P T P R T+P P + T PT P T H+ P P
Sbjct: 107 HTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPPTTKP 166
Query: 514 HRL-PH-EDPHRAR 549
H PH PH +
Sbjct: 167 HTTKPHTTKPHTTK 180
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 358 TSPSKPCSRCTRPVVPPVSCWTPATVSP-TPCPSTK 462
+SP KP T+PVVP P+ + P P PS+K
Sbjct: 1511 SSPPKPVKPSTKPVVPVKPVKPPSPIKPKPPIPSSK 1546
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 27 CETGLAHT 4
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 231 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 64
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 63 DRGEHGARSIISCETGLAHT 4
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 284 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 376
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_8336| Best HMM Match : Plasmodium_HRP (HMM E-Value=0.84)
Length = 509
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = +1
Query: 337 HSTRPPCT-SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
H RPP S P +R T P P + PAT +PT +T + TP+
Sbjct: 27 HHQRPPLLPSQQLPHNRTTTPTTPTTTT-PPATTTPTKPTNTTPPATTTPT 76
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 340 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 137 TTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKSTTTTPPATTTPT 188
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +1
Query: 337 HSTRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
++T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 66 NTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPTKPTTTTPPATTTPT 118
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 340 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 53 TTPPATTTPTKPTNTTPPATTTPTKPTTTTPPATTTPTTPTTTTPPATTTPT 104
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 340 STRPPCTSPSKPCSRC---TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 109 TTPPATTTPTKPTTTTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 160
Score = 28.3 bits (60), Expect = 8.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 340 STRPPCTSPSKPCSR---CTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
+T P T+P+KP + T P + PAT +PT +T + TP+
Sbjct: 123 TTPPGTTTPTKPTTTTPPATTTPTKPTTTTPPATTTPTKPTTTTPPATTTPT 174
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 231 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 64
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 63 DRGEHGARSIISCETGLAHT 4
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 231 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 64
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 63 DRGEHGARSIISCETGLAHT 4
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 231 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 64
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 63 DRGEHGARSIISCETGLAHT 4
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 2.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 364 PSKPCSRCTRPVVPP 408
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 231 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 64
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 63 DRGEHGARSIISCETGLAHT 4
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -2
Query: 231 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 64
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 63 DRGEHGARSIISCETGLAHT 4
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_29252| Best HMM Match : Cytadhesin_P30 (HMM E-Value=1.4)
Length = 1439
Score = 29.9 bits (64), Expect = 2.8
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +1
Query: 349 PPCTSPSKPCSRCTRP-VVPPVSCWTPATVSPTPCPSTKDTHSPTP 483
PP T P+ P S P VP + P V+P P + PTP
Sbjct: 332 PPVTEPAPPSSVVAPPPAVPTPATAPPPVVAPPPSVFASSSGVPTP 377
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 29.9 bits (64), Expect = 2.8
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Frame = +1
Query: 352 PCTSPSKPCSRCTRPVVPPVS-----CWTPATVSPTPC 450
PC P PC P V PV C P V+ TPC
Sbjct: 551 PCVDPVTPCVDPVTPYVDPVKVSVTPCVDPVKVAVTPC 588
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 352 PCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 456
PC P PC P V PV V P PS
Sbjct: 376 PCVDPVTPCVDPVTPYVDPVKVAVTPCVDPVKVPS 410
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -2
Query: 138 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 4
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_57048| Best HMM Match : S-antigen (HMM E-Value=3.4)
Length = 242
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = +1
Query: 418 WTPATVSPTPCPSTKDTHSPTPSCVWX*PVGPHRLPHEDPH 540
WTP + P T+ H P W P GPH P +PH
Sbjct: 193 WTPHRPNTDP---TRTPHGPHTDPTWT-PHGPHTDPTRNPH 229
>SB_40649| Best HMM Match : AT_hook (HMM E-Value=3.7)
Length = 240
Score = 29.5 bits (63), Expect = 3.6
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 6/82 (7%)
Frame = +1
Query: 379 SRCTRPVVPPVSCWT--PAT-VSPTPCPSTKDTHSPTPSCVWX*PVGPHRLPHED--PHR 543
S + PV+P T PA V+ TP P+T+ + P PSC+ + PHE P R
Sbjct: 156 SHGSHPVIPTECNQTVPPAEPVAETP-PTTQANNDPVPSCMPDASSQAPQPPHEPRRPTR 214
Query: 544 ARLL-VHYQFRAGNRFVTSRRS 606
AR Y+ GN V RS
Sbjct: 215 ARTRPKRYEPETGNWTVAGVRS 236
>SB_36880| Best HMM Match : DUF1337 (HMM E-Value=0.54)
Length = 367
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 323 DHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIR 469
DH + I+ V RH L R R+ H +R L+ + H+A LR ++
Sbjct: 277 DHTQKIKEENKVLRHELLMLIRRTRALHEHREELQAQ---HKALLREVQ 322
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 5/55 (9%)
Frame = +1
Query: 334 KHSTRPPCTSPSKPCSRCTRPVVPPVSC----WTPAT-VSPTPCPSTKDTHSPTP 483
KH + P PS P S ++P + P T + PTP P T +PTP
Sbjct: 205 KHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTP 259
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 27 CETGLAHT 4
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.8
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 204 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 28
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 27 CETGLAHT 4
CET L T
Sbjct: 61 CETQLVLT 68
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 288 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 416
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 28.7 bits (61), Expect = 6.4
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +1
Query: 346 RPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 483
RPP + C+ C P + P T PTP P + + +P P
Sbjct: 135 RPPVCPCKQECNFCCIEEEKPTTTKKPTT-KPTPAPHSSPSPTPPP 179
>SB_19751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2644
Score = 28.7 bits (61), Expect = 6.4
Identities = 17/47 (36%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Frame = +1
Query: 358 TSPSKPCS-RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCVW 495
T P P + + T P P T TV PT PS D T C W
Sbjct: 1691 TCPITPVNAKPTNPWTTPAPSPTATTVGPTLAPSQWDCSFETNLCSW 1737
>SB_6983| Best HMM Match : rve (HMM E-Value=0.011)
Length = 251
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 388 TRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPSCV 492
T VVPP+ P V P+P + + SPTPSC+
Sbjct: 207 TPAVVPPI----PTLVVPSPL-TQPEVESPTPSCI 236
>SB_42612| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.7 bits (61), Expect = 6.4
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +1
Query: 334 KHSTRPPCTSPSKPCSRCT--RPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 486
K TRP TS + S+ RP P++ +P S + P+ D HSPT S
Sbjct: 428 KPVTRPKTTSGTLSVSKSIPPRPSTEPITTSSPYRHSWSYVPNFVDYHSPTSS 480
>SB_11585| Best HMM Match : TPR_MLP1_2 (HMM E-Value=2.2)
Length = 610
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 361 SPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTP 483
+PS+ S PV S + T++ P P + DT SPTP
Sbjct: 306 TPSRLVSLQNSPVKMMRSTLSAQTLAENPIPESTDTTSPTP 346
>SB_1754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1521
Score = 28.7 bits (61), Expect = 6.4
Identities = 22/61 (36%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -1
Query: 439 ETPSPESSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALG--LRGASVSRT 266
ETPSP + P PDA TAW + L S + V S G LRGA +
Sbjct: 90 ETPSPALESAPAAMPDA--TDTAWTCLIVTYYLE-SEALHVSASASRSGRRLRGADAGKR 146
Query: 265 G 263
G
Sbjct: 147 G 147
>SB_34370| Best HMM Match : DUF1656 (HMM E-Value=0.59)
Length = 764
Score = 28.3 bits (60), Expect = 8.4
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 317 DPDHV-RNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTPPRH 484
DP HV R +RHVRR PS + VR ++ +RR L R H+R RH
Sbjct: 224 DPRHVKRKTLDSRHVRRKPSDSRHVRRKTLDSRH--VRRNTLDSR-HVRCNTLDSRH 277
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 28.3 bits (60), Expect = 8.4
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -2
Query: 144 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL 13
FA CL + V+LSH + H L A +HG R+ SCET L
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQL 506
>SB_8208| Best HMM Match : ShTK (HMM E-Value=1.2e-21)
Length = 226
Score = 28.3 bits (60), Expect = 8.4
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = +1
Query: 328 CSKHSTRPPCTSPSKPCSRCTRPVVPPVS--CWTPATVSPTPCPSTKDTHSPT 480
C +H T K C C + PP+ T T +PT P TK T +PT
Sbjct: 167 CRRHKTYMNIYC-RKSCGFCGKAPHPPIQEPPVTKTTTAPTEPPVTKTTTAPT 218
>SB_4647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2735
Score = 28.3 bits (60), Expect = 8.4
Identities = 21/74 (28%), Positives = 35/74 (47%)
Frame = +2
Query: 287 PQPQGQQREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRI 466
PQ G EDD D+V+ ++ +RH + +V+ S RA RR R +R
Sbjct: 647 PQVDGANDEDDTDNVQLESRSQGQQRHSNSKSSVQSSSELVKRARTTRRLGVSRVKIRVS 706
Query: 467 RTPPRHPASGLSRS 508
+T + P+ +R+
Sbjct: 707 QTHSQ-PSQATART 719
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,388,838
Number of Sequences: 59808
Number of extensions: 714073
Number of successful extensions: 2913
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 2310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2831
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2431332827
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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