Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0642
         (304 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains: Apo...    65   3e-10
UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- ...    33   0.95 
UniRef50_A6GIB1 Cluster: Mixed type I polyketide synthase-peptid...    32   2.9  
UniRef50_A4RJC0 Cluster: Putative uncharacterized protein; n=1; ...    31   3.8  

>UniRef50_Q25490 Cluster: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)]; n=5;
            Ditrysia|Rep: Apolipophorins precursor [Contains:
            Apolipophorin-2 (Apolipophorin II) (apoLp-2);
            Apolipophorin-1 (Apolipophorin I) (apoLp-1)] - Manduca
            sexta (Tobacco hawkmoth) (Tobacco hornworm)
          Length = 3305

 Score = 65.3 bits (152), Expect = 3e-10
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = +3

Query: 6    SAQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVCVN 137
            + QQKQFIQTAA+ I  ++  EQ+ Q CTC +VDPFRVRSVC N
Sbjct: 3251 AGQQKQFIQTAAHNIIQRMWREQIVQQCTCVFVDPFRVRSVCFN 3294


>UniRef50_UPI0000DB72C7 Cluster: PREDICTED: similar to Retinoid- and
            fatty-acid binding protein CG11064-PA isoform 1; n=1;
            Apis mellifera|Rep: PREDICTED: similar to Retinoid- and
            fatty-acid binding protein CG11064-PA isoform 1 - Apis
            mellifera
          Length = 3360

 Score = 33.5 bits (73), Expect = 0.95
 Identities = 16/42 (38%), Positives = 23/42 (54%)
 Frame = +3

Query: 6    SAQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVRSVC 131
            S Q+KQF+Q AA  I   L++ +  + C+C Y      RS C
Sbjct: 3301 SNQKKQFVQVAAKRIADSLVNVEFEKDCSCLYEYGMIGRSKC 3342


>UniRef50_A6GIB1 Cluster: Mixed type I polyketide synthase-peptide
            synthetase; n=1; Plesiocystis pacifica SIR-1|Rep: Mixed
            type I polyketide synthase-peptide synthetase -
            Plesiocystis pacifica SIR-1
          Length = 1403

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = -3

Query: 173  LLPPARSVFLILVYADRANPKRIHVGAGT*LRQLL-AEELVRDGVGG 36
            +LP   SV L L   DR  P +   GAG  L QL+    LV +G GG
Sbjct: 1053 ILPGVASVELALAALDRVAPGQARGGAGVRLEQLMWLRPLVAEGPGG 1099


>UniRef50_A4RJC0 Cluster: Putative uncharacterized protein; n=1;
           Magnaporthe grisea|Rep: Putative uncharacterized protein
           - Magnaporthe grisea (Rice blast fungus) (Pyricularia
           grisea)
          Length = 1037

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = -3

Query: 203 R*DDLDFTMLLLPPARSVFLILVYADRANP--KRIHV 99
           R  DLD     LPP++ +F+  VY D  NP  K +HV
Sbjct: 327 RCSDLDLRKFHLPPSQIMFIWQVYCDNVNPVTKLLHV 363


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 249,528,127
Number of Sequences: 1657284
Number of extensions: 3689823
Number of successful extensions: 6702
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6702
length of database: 575,637,011
effective HSP length: 77
effective length of database: 448,026,143
effective search space used: 10304601289
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)