Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0642
         (304 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   2.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   3.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    20   5.0  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    20   5.0  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    20   6.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   6.6  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    20   6.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    19   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    19   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    19   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    19   8.7  

>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = -2

Query: 294 FFIITMTWLLINTIHMNEAGRSHVSRCDNI 205
           FFII   ++   T+H +     + +R DN+
Sbjct: 12  FFIIFSDFVNGKTLHRSTRDDKYTTRYDNV 41


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 218 RETCDRPASFICMVLISNHVIVI 286
           RE  D   + +CM  + +HV  I
Sbjct: 438 REFFDEKLNALCMTWLMDHVFAI 460


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -2

Query: 267 LINTIHMNEAGRSHVSRCDNIKM 199
           +I+  H N+     + +C N+ M
Sbjct: 83  IIDKTHRNQCRACRLKKCQNVGM 105


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 6/23 (26%), Positives = 12/23 (52%)
 Frame = -2

Query: 267 LINTIHMNEAGRSHVSRCDNIKM 199
           +I+  H N+     + +C N+ M
Sbjct: 83  IIDKTHRNQCRACRLKKCQNVGM 105


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +3

Query: 33  TAANTITHKLLSEQLSQL 86
           + +NT T  LLSE L+ L
Sbjct: 62  SVSNTNTEPLLSEALTNL 79


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 173 LLPPARSVFLILVYADRA 120
           +LP  ++ +LI+++AD A
Sbjct: 70  MLPIYKNTYLIILFADFA 87


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 173 LLPPARSVFLILVYADRA 120
           +LP  ++ +LI+++AD A
Sbjct: 88  MLPIYKNTYLIILFADFA 105


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 45   TITHKLLSEQLSQLCT 92
            TI H L S +L+  CT
Sbjct: 1352 TIAHILASTELNLCCT 1367


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 45   TITHKLLSEQLSQLCT 92
            TI H L S +L+  CT
Sbjct: 1352 TIAHILASTELNLCCT 1367


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 45   TITHKLLSEQLSQLCT 92
            TI H L S +L+  CT
Sbjct: 1352 TIAHILASTELNLCCT 1367


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 19.4 bits (38), Expect = 8.7
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 45   TITHKLLSEQLSQLCT 92
            TI H L S +L+  CT
Sbjct: 1352 TIAHILASTELNLCCT 1367


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,487
Number of Sequences: 336
Number of extensions: 1037
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5412171
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)