BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0642 (304 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar... 25 3.2 SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharo... 24 5.6 SPBC660.12c |||peptide epimerase |Schizosaccharomyces pombe|chr ... 23 7.5 SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pomb... 23 9.9 SPAC644.14c |rhp51|rad51|recombinase Rhp51|Schizosaccharomyces p... 23 9.9 >SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosaccharomyces pombe|chr 1|||Manual Length = 630 Score = 24.6 bits (51), Expect = 3.2 Identities = 10/31 (32%), Positives = 15/31 (48%) Frame = -1 Query: 202 DEMILTSRCSYFRLREASFLSLFTQTERTLN 110 DE++ C YF +F + +T R LN Sbjct: 335 DEILWAKTCMYFTRGSLTFAEAYKRTGRILN 365 >SPAC23D3.13c |||guanyl-nucleotide exchange factor|Schizosaccharomyces pombe|chr 1|||Manual Length = 1616 Score = 23.8 bits (49), Expect = 5.6 Identities = 11/33 (33%), Positives = 15/33 (45%) Frame = +2 Query: 185 SQDHLILILSHRETCDRPASFICMVLISNHVIV 283 SQD L+ L E +P F C I H+ + Sbjct: 43 SQDSLVSKLKGNEAFYKPFLFCCAKKIERHIYI 75 >SPBC660.12c |||peptide epimerase |Schizosaccharomyces pombe|chr 2|||Manual Length = 392 Score = 23.4 bits (48), Expect = 7.5 Identities = 12/39 (30%), Positives = 20/39 (51%) Frame = +2 Query: 167 EVGAS*SQDHLILILSHRETCDRPASFICMVLISNHVIV 283 +VG +D + + R +P +FIC +L S VI+ Sbjct: 135 DVGVEIDEDLFLKEVEQRFLQSKPRAFICDILSSMPVIL 173 >SPBC582.08 |||alanine aminotransferase |Schizosaccharomyces pombe|chr 2|||Manual Length = 505 Score = 23.0 bits (47), Expect = 9.9 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -3 Query: 176 LLLPPARSVFLILVYADRANPKRIHVGAGT*LRQLLA 66 LL P+ F +VYA+ NP+++ T +RQ+L+ Sbjct: 59 LLENPSSYPFSEIVYANIGNPQQMGQSPITFVRQVLS 95 >SPAC644.14c |rhp51|rad51|recombinase Rhp51|Schizosaccharomyces pombe|chr 1|||Manual Length = 365 Score = 23.0 bits (47), Expect = 9.9 Identities = 12/40 (30%), Positives = 18/40 (45%) Frame = +3 Query: 3 NSAQQKQFIQTAANTITHKLLSEQLSQLCTCTYVDPFRVR 122 N+ Q + +Q AAN ++ S + CT Y F R Sbjct: 218 NADHQLELLQQAANMMSESRFSLLVVDSCTALYRTDFSGR 257 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,009,887 Number of Sequences: 5004 Number of extensions: 14809 Number of successful extensions: 27 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 27 length of database: 2,362,478 effective HSP length: 63 effective length of database: 2,047,226 effective search space used: 75747362 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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