Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0642
         (304 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   2.5  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    21   3.3  
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    21   4.4  
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    21   4.4  

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 2.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 183 HDAPTSACAKRLSYPCLRRQSEP*TDP 103
           ++ P      R  +P LRR++EP  +P
Sbjct: 99  NNRPVYISQPRPPHPRLRREAEPEAEP 125



 Score = 21.4 bits (43), Expect = 2.5
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 183 HDAPTSACAKRLSYPCLRRQSEP*TDP 103
           ++ P      R  +P LRR++EP  +P
Sbjct: 155 NNRPVYISQPRPPHPRLRREAEPEAEP 181



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 53  RPPHPRLRREAEPEAEP 69



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 193 RPPHPRLRREAEPEAEP 209



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 221 RPPHPRLRREAEPEAEP 237


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDPRRCRYI 85
           R  +P LRR++EP  +P   R I
Sbjct: 54  RPPHPRLRREAEPKAEPGNNRPI 76


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor
           protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 54  RPPHPRLRREAEPEAEP 70



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 82  RPPHPRLRREAEPEAEP 98



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 110 RPPHPRLRREAEPEAEP 126


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
           protein.
          Length = 199

 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 25  RPPHPRLRREAEPEAEP 41



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 53  RPPHPRLRREAEPEAEP 69



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 81  RPPHPRLRREAEPEAEP 97



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 109 RPPHPRLRREAEPEAEP 125



 Score = 20.6 bits (41), Expect = 4.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 153 RLSYPCLRRQSEP*TDP 103
           R  +P LRR++EP  +P
Sbjct: 165 RPPHPRLRREAEPEAEP 181


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,925
Number of Sequences: 438
Number of extensions: 1020
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)