Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0641
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.57 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    25   0.75 
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.75 
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   5.3  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   7.0  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 412 LMCSY*FKCRVKLLPVHMI*CCTVV 338
           L+C Y F C   +  +H++ CC  +
Sbjct: 163 LLCIYHFFCAFIIFTMHLLFCCAFI 187


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 88  HYLLIKTIFLSK*MDLYLAHHKIYTKQT 5
           +YL    I +S  + L+L H+++  +QT
Sbjct: 220 YYLYFDVIVISTFLQLFLEHYEVINRQT 247


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 88  HYLLIKTIFLSK*MDLYLAHHKIYTKQT 5
           +YL    I +S  + L+L H+++  +QT
Sbjct: 146 YYLYFDVIVISTFLQLFLEHYEVINRQT 173


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +3

Query: 687 ESGTMSPRSGIAWSESENWGXLEHSGESPTPNQQR 791
           ++G+M+P S  + +  E        G+ PTP+  R
Sbjct: 33  DTGSMTPNSAASPAPPEEEAASPTPGDVPTPSSPR 67


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = -3

Query: 167 HYFINLTTVQTPITFINSRL 108
           HY +N+  V++P+T  + RL
Sbjct: 352 HYELNMVEVRSPVTPADLRL 371


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/13 (61%), Positives = 11/13 (84%)
 Frame = -2

Query: 765 HRCAPGDPSFHSR 727
           HR  PGDP+FH++
Sbjct: 432 HR-PPGDPAFHNQ 443


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 337 RRHAYIHDLFQ 305
           R HAYI D+FQ
Sbjct: 401 RWHAYIDDMFQ 411


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,756
Number of Sequences: 336
Number of extensions: 4265
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)