Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0641
         (844 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128416-1|AAM75009.1|  907|Drosophila melanogaster GH06923p pro...    58   2e-08
AE014134-2029|AAF53068.2|  907|Drosophila melanogaster CG6192-PA...    58   2e-08
AY119492-1|AAM50146.1|  258|Drosophila melanogaster GH08425p pro...    30   3.5  
AE014298-2463|ABC67188.1|  258|Drosophila melanogaster CG4678-PC...    30   3.5  
AE014298-2462|AAN09418.1|  470|Drosophila melanogaster CG4678-PB...    30   3.5  
AE014298-2461|AAF48652.2|  470|Drosophila melanogaster CG4678-PA...    30   3.5  

>AY128416-1|AAM75009.1|  907|Drosophila melanogaster GH06923p
           protein.
          Length = 907

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 30/62 (48%), Positives = 45/62 (72%)
 Frame = +2

Query: 254 ILKATELFRSSNISNDILKQIMDISVSPNNCATLNHMNRKQFYSALKLIAAHQTNIALKP 433
           +LKATELFRS++I+N+ + +I  ++  P+   T  H++R QFYS LKLIAAHQ  + L+ 
Sbjct: 30  MLKATELFRSADIANETVIEITGLAGIPS---TALHISRTQFYSCLKLIAAHQAAMPLRQ 86

Query: 434 DL 439
           +L
Sbjct: 87  EL 88



 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +3

Query: 171 DLNLTXTETRYFGDLFLCCDEESNGKIPF*K 263
           D++LT  ETR++ +LF CCD E  GK+P  K
Sbjct: 2   DVSLTEPETRFYSELFQCCDVEKTGKVPMLK 32


>AE014134-2029|AAF53068.2|  907|Drosophila melanogaster CG6192-PA
           protein.
          Length = 907

 Score = 58.0 bits (134), Expect = 2e-08
 Identities = 30/62 (48%), Positives = 45/62 (72%)
 Frame = +2

Query: 254 ILKATELFRSSNISNDILKQIMDISVSPNNCATLNHMNRKQFYSALKLIAAHQTNIALKP 433
           +LKATELFRS++I+N+ + +I  ++  P+   T  H++R QFYS LKLIAAHQ  + L+ 
Sbjct: 30  MLKATELFRSADIANETVIEITGLAGIPS---TALHISRTQFYSCLKLIAAHQAAMPLRQ 86

Query: 434 DL 439
           +L
Sbjct: 87  EL 88



 Score = 42.3 bits (95), Expect = 8e-04
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +3

Query: 171 DLNLTXTETRYFGDLFLCCDEESNGKIPF*K 263
           D++LT  ETR++ +LF CCD E  GK+P  K
Sbjct: 2   DVSLTEPETRFYSELFQCCDVEKTGKVPMLK 32


>AY119492-1|AAM50146.1|  258|Drosophila melanogaster GH08425p
           protein.
          Length = 258

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 516 LSNSPKEHHISKRERXFVGNISAYEPI 596
           +S+SP EH + K +  +VGNI   EP+
Sbjct: 112 VSSSPYEHMVGKPDVKYVGNIHGNEPV 138


>AE014298-2463|ABC67188.1|  258|Drosophila melanogaster CG4678-PC,
           isoform C protein.
          Length = 258

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 516 LSNSPKEHHISKRERXFVGNISAYEPI 596
           +S+SP EH + K +  +VGNI   EP+
Sbjct: 112 VSSSPYEHMVGKPDVKYVGNIHGNEPV 138


>AE014298-2462|AAN09418.1|  470|Drosophila melanogaster CG4678-PB,
           isoform B protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 516 LSNSPKEHHISKRERXFVGNISAYEPI 596
           +S+SP EH + K +  +VGNI   EP+
Sbjct: 112 VSSSPYEHMVGKPDVKYVGNIHGNEPV 138


>AE014298-2461|AAF48652.2|  470|Drosophila melanogaster CG4678-PA,
           isoform A protein.
          Length = 470

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 12/27 (44%), Positives = 18/27 (66%)
 Frame = +3

Query: 516 LSNSPKEHHISKRERXFVGNISAYEPI 596
           +S+SP EH + K +  +VGNI   EP+
Sbjct: 112 VSSSPYEHMVGKPDVKYVGNIHGNEPV 138


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,954,231
Number of Sequences: 53049
Number of extensions: 757317
Number of successful extensions: 1908
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1906
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4024321392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)