Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0641
         (844 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81054-7|CAB02881.1|  472|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical pr...    29   5.5  
U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical pr...    28   7.2  
AF125962-1|AAD14741.1|  341|Caenorhabditis elegans Seven tm rece...    28   7.2  
U51999-3|AAA96084.1|  306|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z81054-7|CAB02881.1|  472|Caenorhabditis elegans Hypothetical
           protein F01D4.4 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 507 LIQLSNSPKEHHISKRERXFVGNISAYEPI 596
           +IQ S +P EH  +K E   +GN+   EPI
Sbjct: 77  VIQFSTTPGEHIPTKPEVKLIGNMHGNEPI 106


>U50184-1|ABJ99064.1| 1540|Caenorhabditis elegans Hypothetical
           protein W03A3.2 protein.
          Length = 1540

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 11/33 (33%), Positives = 21/33 (63%)
 Frame = +2

Query: 419 IALKPDLYQLLLIFHFRGSRGHLTQKLILINTV 517
           IAL  +L+ L L++ ++ SR  + QK+  I ++
Sbjct: 408 IALDTELHMLYLVYFYKNSRAQIIQKIFKIYSI 440


>U00036-5|AAT92064.1|  446|Caenorhabditis elegans Hypothetical
           protein R151.2d protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -2

Query: 735 HSRTTRSQILGTXFXTPIPESVL 667
           H+R+ R++ LGT    P+PE +L
Sbjct: 15  HNRSARNEFLGTHPTLPVPEDIL 37


>AF125962-1|AAD14741.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 113 protein.
          Length = 341

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +2

Query: 20  NFVMSKIQIHLFTKEYGFYQ*IMITFVV 103
           NFV+  + +   TK YG Y+ +MITF V
Sbjct: 25  NFVLILLLVFRPTKSYGSYKYLMITFCV 52


>U51999-3|AAA96084.1|  306|Caenorhabditis elegans Hypothetical
           protein C43H6.7 protein.
          Length = 306

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 349 CTVVRRHAYIHDLFQNIIGYVRRSK*FCCF*NGI 248
           CT +  HA + D+  +  G+ R S  FC   +GI
Sbjct: 184 CTTILEHAPLQDIICDYDGFARTSVVFCYLLSGI 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,050,085
Number of Sequences: 27780
Number of extensions: 393505
Number of successful extensions: 879
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)