Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0640
(580 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46525| Best HMM Match : Thymosin (HMM E-Value=0) 36 0.018
SB_9346| Best HMM Match : AMMECR1 (HMM E-Value=2.6) 33 0.22
SB_56468| Best HMM Match : Bundlin (HMM E-Value=8.7) 33 0.22
SB_31884| Best HMM Match : Rhabdo_M1 (HMM E-Value=0.36) 32 0.39
SB_3169| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.68
SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24) 29 2.1
SB_47113| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_43445| Best HMM Match : PDZ (HMM E-Value=8.9e-07) 28 4.8
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_21255| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3) 27 8.4
>SB_46525| Best HMM Match : Thymosin (HMM E-Value=0)
Length = 750
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/51 (43%), Positives = 25/51 (49%)
Frame = +3
Query: 288 KHTETSGEEPAFRTKDAIEAEKEKNKF*TASRTSIPTKLKHTETCXKNPLP 440
+H ET E+ TKD I EK F + KLKH ET KNPLP
Sbjct: 463 QHVETK-EKNTLPTKDTIADEKRTAPF-SGVEVFQKNKLKHVETLEKNPLP 511
Score = 35.1 bits (77), Expect = 0.042
Identities = 22/51 (43%), Positives = 28/51 (54%)
Frame = +3
Query: 288 KHTETSGEEPAFRTKDAIEAEKEKNKF*TASRTSIPTKLKHTETCXKNPLP 440
KH ET E+ TKD IEAE ++ ++ +KLKH T KNPLP
Sbjct: 540 KHVETK-EKVVMPTKDVIEAEAIDSR--AEVKSFDHSKLKHVVTQEKNPLP 587
Score = 33.5 bits (73), Expect = 0.13
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +3
Query: 288 KHTETSGEEPAFRTKDAIEAEKEKNKF*TASRTSIPTKLKHTETCXKNPLP 440
KH E + P TKD I E + + +T +KLKH +T KNPLP
Sbjct: 692 KHVEVQEKNP-LPTKDDITTESTETR--AEVKTFDHSKLKHVQTEEKNPLP 739
Score = 28.3 bits (60), Expect = 4.8
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%)
Frame = +3
Query: 216 LPTEKDPRKSLFDGIEKV*-FEPS*-KHTETSGEEP---AFRTKDAIEAEKEKNKF*TAS 380
+P+++D ++ D +V F+ S KH ET + P A K+ + E + AS
Sbjct: 626 MPSQEDIKEEAVDSRAEVKSFDHSKLKHVETVEKNPLPSAAVLKEEMRPEVLPDVSAVAS 685
Query: 381 RTSIPTKLKHTETCXKNPLPHK 446
+ +KLKH E KNPLP K
Sbjct: 686 FDA--SKLKHVEVQEKNPLPTK 705
>SB_9346| Best HMM Match : AMMECR1 (HMM E-Value=2.6)
Length = 490
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Frame = +1
Query: 199 GLLKDGCQLRKTPESLYSTVSRKF------DSSPAESTPRLQEKNPLSGQKTLSKRRRKR 360
G DGCQ R P SL S V+ ++ ES P L + + ++ +
Sbjct: 168 GSFSDGCQQRSVPASLISLVAMLLNGVNIENTCAQESQPCLTVAQAILFNAKVESAKKSK 227
Query: 361 TNSERHRELRFP 396
T RH +LR P
Sbjct: 228 TGQTRHTKLREP 239
>SB_56468| Best HMM Match : Bundlin (HMM E-Value=8.7)
Length = 496
Score = 32.7 bits (71), Expect = 0.22
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Frame = +1
Query: 199 GLLKDGCQLRKTPESLYSTVSRKF------DSSPAESTPRLQEKNPLSGQKTLSKRRRKR 360
G DGCQ R P SL S V+ ++ ES P L + + ++ +
Sbjct: 105 GSFSDGCQQRSVPASLISLVAMLLNGVNIENTCAQESQPCLTVAQAILFNAKVESAKKSK 164
Query: 361 TNSERHRELRFP 396
T RH +LR P
Sbjct: 165 TGQTRHTKLREP 176
>SB_31884| Best HMM Match : Rhabdo_M1 (HMM E-Value=0.36)
Length = 456
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 220 QLRKTPESLYSTVSRKFDSSPAESTPR-LQEKNPLSGQKTLSKRRRKRTNSER 375
Q RK PES S V +F+S PA S L + S + +S ++ +TN+ R
Sbjct: 301 QKRKKPESSQSDVDEEFESVPASSQRSWLASQQKASKRPRVSYGKKDKTNTSR 353
>SB_3169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1096
Score = 31.1 bits (67), Expect = 0.68
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 6/72 (8%)
Frame = +1
Query: 199 GLLKDGCQLRKTPESLYSTVSRKF------DSSPAESTPRLQEKNPLSGQKTLSKRRRKR 360
G DGCQ R P SL S V+ ++ ES P L + + ++ +
Sbjct: 42 GSFSDGCQQRSAPASLISLVAMLLNGVNIENTCAQESQPCLTVAQAILFNAKVEPAKKCK 101
Query: 361 TNSERHRELRFP 396
T RH +LR P
Sbjct: 102 TGQTRHTKLREP 113
>SB_23156| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 29.9 bits (64), Expect = 1.6
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = +1
Query: 232 TPESLYSTVSRKFDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTNSERHRELRFP 396
+P SL ST+S SSP STPR Q + P S S RR+ ++ R + P
Sbjct: 67 SPLSL-STLS-PLASSPPVSTPRQQRRTPPSFTPRSSISRRRSDTPKKRRRISVP 119
>SB_11987| Best HMM Match : OTU (HMM E-Value=1.1e-24)
Length = 1142
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 268 FDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTN 366
FD PA+ TP E+N +S + LS++ + N
Sbjct: 606 FDKGPADYTPSTDEENHISDYQQLSEKPKNELN 638
>SB_47113| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/57 (22%), Positives = 27/57 (47%)
Frame = +3
Query: 192 WFRSAERRLPTEKDPRKSLFDGIEKV*FEPS*KHTETSGEEPAFRTKDAIEAEKEKN 362
W + E+D + +F G+E+ ++ + + EE + + A +AE+E N
Sbjct: 581 WINEPPKETSEEEDNAEDMFAGVEEQSYKTQVRKEQEPDEEELEKRRVARQAERESN 637
>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/72 (23%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Frame = +1
Query: 172 TTNEKECGFGLLKD--GCQLRKTPESLYSTVSRKFDSSPAESTPRLQEKNPLSGQKTLSK 345
T +K+ + +D G L +ST+S SSP + P ++ +S +++ +
Sbjct: 482 TKKKKKTSHSIPRDEFGVPLEAPSPLSFSTLSPLATSSPRRTPPSFTPRSSISRRRSDTP 541
Query: 346 RRRKRTNSERHR 381
++R+R + R R
Sbjct: 542 KKRRRISVPRRR 553
>SB_43445| Best HMM Match : PDZ (HMM E-Value=8.9e-07)
Length = 373
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 235 PESLYSTVSRKFDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTN 366
P + +T + ++P T R K+P+ G++TLS R T+
Sbjct: 277 PSAGNATAASPVTTAPPRQTSRRSTKSPVHGKRTLSPIRESTTD 320
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 28.3 bits (60), Expect = 4.8
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +1
Query: 232 TPESLYSTVSRKFDSSPAESTPRLQEKNPLS-GQKTLSKRRRKRTNSERHR 381
+P SL ST+S +SP STPR Q + P S ++ RRR T +R R
Sbjct: 92 SPPSL-STLS-PLAASPPVSTPRQQRRTPSSFTPRSSISRRRSDTPKKRRR 140
>SB_54822| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1652
Score = 27.9 bits (59), Expect = 6.3
Identities = 9/25 (36%), Positives = 18/25 (72%)
Frame = -1
Query: 445 LWGSGFXSHVSVCFSLVGIEVLDAV 371
+WG SHV+VC ++ G+++L ++
Sbjct: 226 IWGVHVSSHVTVCATVYGVQLLFSI 250
>SB_21255| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 113 WRPLGRSFREGVSLTEQAILNQYIF 39
W G+ F E +SLT Q N +IF
Sbjct: 10 WETAGKKFLENISLTPQVQFNVHIF 34
>SB_56568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +1
Query: 223 LRKTPESLYSTVSRKFDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTNSERHR 381
LRK E+L S +++KF+ + + ++E L K R K++N + ++
Sbjct: 197 LRKEKENLVSELTKKFEMLEGQKSSLVEENKVLQDSVKDLKIRLKKSNQDLNK 249
>SB_21812| Best HMM Match : GRASP55_65 (HMM E-Value=2.3)
Length = 660
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = +1
Query: 235 PESLYSTVSRKFDSSPAESTPRLQEKNPLSGQKTLSKRRRKRTNSERHRELRFP 396
P SL T+S + P STPR Q + P S S RR+ + R + P
Sbjct: 449 PSSLPPTLSPLASTQPV-STPRQQRRTPPSFTPRSSISRRRSDTPIKQRRISVP 501
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,606,361
Number of Sequences: 59808
Number of extensions: 318087
Number of successful extensions: 785
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 785
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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